Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., Flagellar biosynthesis protein FlhA from Alteromonas macleodii MIT1002

 Score =  922 bits (2382), Expect = 0.0
 Identities = 467/684 (68%), Positives = 565/684 (82%), Gaps = 4/684 (0%)

Query: 16  QRSMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFP 75
           Q     +GAP+++LA + MV+LPMP FLLD+ F+FNIALSLV++LV V T+RP+DF  FP
Sbjct: 16  QNFTSGLGAPIVLLAIMGMVILPMPPFLLDVLFSFNIALSLVIILVAVLTQRPVDFGIFP 75

Query: 76  TVLLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMI 135
            VLLIAT+LRLALNVASTRVVLLYGHEG  AAG VIEAFG VVIGGNYAVG+VVF IL+I
Sbjct: 76  LVLLIATVLRLALNVASTRVVLLYGHEGGDAAGKVIEAFGEVVIGGNYAVGIVVFAILLI 135

Query: 136 INFMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFY 195
           INF VVT GAGRISEVSARFTLDA+PGKQMAIDADLNAG IDQ+QAR RR E+T EADFY
Sbjct: 136 INFKVVTAGAGRISEVSARFTLDAMPGKQMAIDADLNAGYIDQDQARKRREEITAEADFY 195

Query: 196 GSMDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQI 255
           GSMDGASKFVKGDA+AG+ I+ INI+GGL IGMIQ+ L F  AIEIYT+LTIGDGLVAQI
Sbjct: 196 GSMDGASKFVKGDAVAGLFIMLINIVGGLFIGMIQHGLSFGNAIEIYTILTIGDGLVAQI 255

Query: 256 PSLLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLF 315
           PSLLLS+  AI+VTR+N  ++MG+++  QL +N +AL I +G+LFVMGI+PGMPH AFL 
Sbjct: 256 PSLLLSVATAIIVTRENETQEMGKEIRGQLGNN-QALYIASGVLFVMGIIPGMPHIAFLG 314

Query: 316 LALLASGAAYWLHRKQKTKAENKNLP---AKSDVETPTQRELSWDDVQPVDVIGLEVGYR 372
            + L +G AYW   ++K KA    +P    K +   P  +EL WDDVQ VD IGLEVGYR
Sbjct: 315 FSFLIAGFAYWQSVQEKRKAAEPKVPDNVVKDESVAPEVKELGWDDVQQVDTIGLEVGYR 374

Query: 373 LIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEA 432
           LIPLVDK QGGELL R+KGVRKKLSQ+ GFLIPPVHIRDNL+L PN+Y I ++GV +G++
Sbjct: 375 LIPLVDKSQGGELLTRIKGVRKKLSQELGFLIPPVHIRDNLDLEPNTYTIAMLGVTIGDS 434

Query: 433 EIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLAT 492
            I  D+ELAINPGQV+G ++G  T+DPAFGLDAVWI+ ++REHAQ LGYTVVD++TV+AT
Sbjct: 435 IISHDEELAINPGQVFGKLEGRATKDPAFGLDAVWIKPNKREHAQTLGYTVVDAATVVAT 494

Query: 493 HLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIP 552
           HLSQLL+NNA QL+GHEE Q LL+ML++  PKLVE  VPD L L  VVKVLQ LL E +P
Sbjct: 495 HLSQLLSNNAYQLLGHEEAQQLLDMLAKQHPKLVEGLVPDILPLSTVVKVLQTLLFEGVP 554

Query: 553 IRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQIL 612
           IRD+RTIVQTLSEY ++SQ+PD+L +AVRI+LKRLIVQEI     E+PVITL PELEQ+L
Sbjct: 555 IRDMRTIVQTLSEYGTRSQDPDVLVSAVRIALKRLIVQEITQGAKEIPVITLAPELEQML 614

Query: 613 HQTMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTI 672
           HQ++QA G + AGIEPGLA++LQ +L  A+Q+QEL+GEPAVLLTSG+LR  L++F+K ++
Sbjct: 615 HQSLQAGGEDGAGIEPGLADKLQKSLQQASQQQELEGEPAVLLTSGMLRPVLSRFLKYSV 674

Query: 673 PNLRVLSYQEIPDEKQIRIVQAVG 696
             L VLSYQE+PD+KQI+IV +VG
Sbjct: 675 VGLHVLSYQEVPDDKQIKIVSSVG 698