Pairwise Alignments

Query, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., flagellar biosynthesis protein from Agrobacterium fabrum C58

 Score =  446 bits (1147), Expect = e-129
 Identities = 249/690 (36%), Positives = 428/690 (62%), Gaps = 22/690 (3%)

Query: 18  SMPAIGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTV 77
           SM  IG  + +++ L ++ LP+P  L+D+   F+IALS+++L+V ++ +RPLDF++FPTV
Sbjct: 15  SMRDIGFALGIISILCVLFLPIPVMLVDIGLAFSIALSVLILMVALWIQRPLDFSSFPTV 74

Query: 78  LLIATLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIIN 137
           LLIAT++RL+LN+A+TRV+L +G+EGP AAG VI  F ++V+ G++ +GL+VFLIL+ +N
Sbjct: 75  LLIATMIRLSLNIATTRVILSHGNEGPTAAGGVIAGFSSLVMSGDFVIGLIVFLILITVN 134

Query: 138 FMVVTKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGS 197
           F+V+TKGA RI+EV ARFTLDA+PGKQM+IDADL+AG+ID+++A+ RR E+ +E+ F+GS
Sbjct: 135 FIVITKGATRIAEVGARFTLDAIPGKQMSIDADLSAGIIDEKEAQRRRRELEEESSFFGS 194

Query: 198 MDGASKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPS 257
           MDGASKFV+GDAIAG++I  IN+ GG+ IG  ++ +   EA +++  L++GDG+V+QIP+
Sbjct: 195 MDGASKFVRGDAIAGLIITAINVFGGIIIGYFRHGMPIGEAADVFVKLSVGDGIVSQIPA 254

Query: 258 LLLSIGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLA 317
           L++S+ A ++V+R  T     Q VI QL   P+AL ++A ++ ++ ++PG+P   F+FL 
Sbjct: 255 LIVSLAAGLLVSRGGTAGSTDQAVINQLSGYPRALMVSAMLMGLLAVIPGLPFVPFIFLG 314

Query: 318 LLASGAAYWLHRK-------QKTKAENKNLPAKSDVETPTQRELSWDDVQPVDVIGLEVG 370
            + +  ++++ R+       ++ + ENK L      +   ++ L   +++    +G +V 
Sbjct: 315 GIMAFGSWYIPRQAEAESALRRQEEENKVLQTTEAEKDSVKQVLKTAEIEL--ALGKQVS 372

Query: 371 YRLIPLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVG 430
            RL+         EL  RV  +RKK +  +GF++P + + D++ +   +Y+I + G  + 
Sbjct: 373 TRLL-----GAHQELAFRVGKMRKKFATQYGFVVPEIKVSDDIMIPEKAYQIRVHGTTIA 427

Query: 431 EAEIRPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVL 490
            + +R    L +        I G+  R+PAFG+ AV I E   E  +  G+  +D+ +V+
Sbjct: 428 SSNLRVGDVLVVTGAGRKPSIPGDEIREPAFGMPAVSILETFTEDLKREGFHPIDNVSVV 487

Query: 491 ATHLSQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEA 550
            THLS+++ NN  QL+ +++V+ L++ L     KL +      +S   +  VL+ LL E 
Sbjct: 488 LTHLSEVIRNNLPQLLSYKDVKILIDRLDPEYKKLADEICSSHMSYSGLQAVLKLLLAER 547

Query: 551 IPIRDIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEI--NGVEPELPVITLIPEL 608
           + IR++  I++ ++E A   ++ + +   VR+ + + +  ++  NGV   L V+ L  + 
Sbjct: 548 VSIRNLHLILEAVAELAPHVRKTEQIVEHVRVRMSQQLCGDLADNGV---LRVLRLGNKW 604

Query: 609 EQILHQTMQA-SGGE--SAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLA 665
           + + HQ ++    GE     I+P   E      S   +E   +G P VL+TS   RS + 
Sbjct: 605 DMVFHQALKRDQKGEIVEFDIDPRHLEEFSEQASKVIREFMDRGLPFVLVTSPETRSYVR 664

Query: 666 KFVKNTIPNLRVLSYQEIPDEKQIRIVQAV 695
             ++     L VLS+ E+    +I+I+ A+
Sbjct: 665 MIIERLFATLPVLSHVELAKGLEIKILGAI 694