Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., signal recognition particle protein from Rhodanobacter sp000427505 FW510-R12

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 55/286 (19%)

Query: 194 ESMREEMTSIR-RLLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSLEMADQLACYIPE 252
           E++RE +  +R  LLE  V+           P+   LI+R++   V  ++   L+   P 
Sbjct: 25  ENIREALREVRIALLEADVA----------LPVVQALIQRIKVRAVGQDVIKSLS---PS 71

Query: 253 ETPPPKAWKALLGLVSDQIPVVKHDI-------LKRGGVVALLGPTGVGKTTTVAKLAAR 305
           +        AL+ +VSD++ VV            +   VV + G  G GKTTTVAKL AR
Sbjct: 72  Q--------ALIKVVSDELTVVMGTANTELNLAQQPPAVVLMAGLQGAGKTTTVAKL-AR 122

Query: 306 AAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGC----------PVRVAKDS-----NE 350
              E     V +V+ D YR  A EQL      +G           PV++AKD+      E
Sbjct: 123 LLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFFPSATGQDPVQIAKDAIAAARRE 182

Query: 351 LADVIYQLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQE 410
           + DV         +LVDTAG    D  +  ++  L   +   I +  V+ +   +     
Sbjct: 183 VVDV---------LLVDTAGRLHVDETMMAEIKAL-HAAITPIETLFVVDSMTGQDAANT 232

Query: 411 TIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQR 456
                  +PL+G I+TK D     G  +SV      P+ ++  G++
Sbjct: 233 AKAFNEALPLTGVILTKTDGDARGGAALSVRYVTGKPIKFLGAGEK 278