Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., flagellar biosynthesis regulator FlhF from Pseudomonas simiae WCS417

 Score =  238 bits (608), Expect = 2e-67
 Identities = 160/473 (33%), Positives = 246/473 (52%), Gaps = 65/473 (13%)

Query: 1   MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVDGDTAPAPAKRYNSQP 60
           M++KRFFA DM+ A+  V++ELG DA I+ N+++AGGVE+ AA+D          Y  Q 
Sbjct: 1   MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALD----------YTPQ- 49

Query: 61  RHGYNQVSPSVAPTKSRELADDRVSLQSSADSGRSMTQRFANMLKQYSSADEQEHRAENE 120
                    ++AP         RV      D  R    R  +   + S   + +    N 
Sbjct: 50  ---------ALAP---------RVPNMELEDELRKTASRIVSAQAELSMRGDSD-ATTNR 90

Query: 121 DSLSALLKRQSENRAPQRNQTQRSQSSSERQRPDSPLGKLLQEDADARRKPRLDPTRYDR 180
              + L    SE             +  E  RP +P        A A  +   D  R+  
Sbjct: 91  QLFAGLPLTASEPLV--------EPTFKEPPRPAAP------APAPAVDQRVFDSMRF-- 134

Query: 181 KVPEEPMVAVSELESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLERMGVSL 240
                      EL  +RE       LLE Q+  L W +++  +P +A L +RL+R+G+S 
Sbjct: 135 -----------ELNGLRE-------LLEVQLGSLAWNQLQGSKPQQANLWRRLQRIGLSG 176

Query: 241 EMADQLACYIPEETPPPKAWKALLGLVSDQIPVVKHDILKRGGVVALLGPTGVGKTTTVA 300
            ++  L     E   P +AW+ LL  ++  I   + + L+ GGV+A++GP G+GKTTT+A
Sbjct: 177 PLSRDLLALTTEIEEPRQAWRMLLAHLARMIVTPEIEPLEEGGVIAMVGPAGMGKTTTLA 236

Query: 301 KLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELADVIYQLRN 360
           KLAAR  ++YG+ N+ALV+ D+YRIGA EQL   GRI+   V        LA+ +  L  
Sbjct: 237 KLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVSVTHVDPGQSLANALDPLLR 296

Query: 361 RRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIEHFRRIPL 420
           +R++L+DTAG+   D  L  QL++L    G    +YLVL  T+Q++VL      ++R  L
Sbjct: 297 KRVVLIDTAGLQASDPALRMQLESLAGR-GIKSKNYLVLATTSQKQVLTAAYHSYKRCGL 355

Query: 421 SGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQPKYMVAKA 473
           +GCI+TKLDE  SLGE +S+ + + LPVAY+ +G R+P+D+ + +   +V++A
Sbjct: 356 AGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPRRHQLVSRA 408