Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Signal recognition particle protein from Pseudomonas sp. DMC3

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVR 343
           V+ + G  G GKTTT  KLA R   E    +V +V+ D YR  A +QL      +G    
Sbjct: 102 VILMAGLQGAGKTTTAGKLA-RFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFF 160

Query: 344 VAKDSNELADVIY------QLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYL 397
            +  S +  D+        +L+   +++VDTAG    D  +  ++  L   +   + +  
Sbjct: 161 PSDLSQKPVDIANAAIKEAKLKFIDVVIVDTAGRLHIDEEMMGEIKAL-HAAINPVETLF 219

Query: 398 VLPATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQR 456
           V+ A   +            +PL+G I+TK+D     G  +SV      P+ +I  G++
Sbjct: 220 VVDAMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEK 278