Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., flagellar biosynthesis protein FlhF from Pseudomonas fluorescens SBW25

 Score =  221 bits (563), Expect = 4e-62
 Identities = 120/308 (38%), Positives = 190/308 (61%), Gaps = 5/308 (1%)

Query: 170 KPRLDPTRYDRKVPEEPMVAVSE----LESMREEMTSIRRLLEHQVSGLMWQEVERREPL 225
           +P ++PT  +   P  P  A +      +SMR E+  +R LLE Q+  L W +++  +P 
Sbjct: 102 EPLVEPTFKEPPRPAAPAPAAAVDQRVFDSMRFELNGLRELLEVQLGSLAWTQLQGSKPQ 161

Query: 226 RAMLIKRLERMGVSLEMADQLACYIPEETPPPKAWKALLGLVSDQIPVVKHDILKRGGVV 285
           +A L +RL+R+G+S  ++  L     E   P +AW+ LL  ++  I   + + L+ GGV+
Sbjct: 162 QANLWRRLQRIGLSGPLSRDLLALTTEIEEPRQAWRMLLAHLARMIATPEIEPLEEGGVI 221

Query: 286 ALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVA 345
           A++GP G+GKTTT+AKLAAR  ++YG+ N+ALV+ D+YRIGA EQL   GRI+   V   
Sbjct: 222 AMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVSVTHV 281

Query: 346 KDSNELADVIYQLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQR 405
                LA+ +  L  +R++L+DTAG+   D  L  QL++L    G    +YLVL  T+Q+
Sbjct: 282 DPGQSLANALDPLLRKRVVLIDTAGLQASDPALRMQLESLAGR-GIKSKNYLVLATTSQK 340

Query: 406 KVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQ 465
           +VL      ++R  L+GCI+TKLDE  SLGE +S+ + + LPVAY+ +G R+P+D+ + +
Sbjct: 341 QVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPR 400

Query: 466 PKYMVAKA 473
              +V++A
Sbjct: 401 RHQLVSRA 408



 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 25/45 (55%), Positives = 37/45 (82%)

Query: 1  MKIKRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVD 45
          M++KRFFA DM+ A+  V++ELG DA I+ N+++AGGVE+ AA+D
Sbjct: 1  MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALD 45