Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Signal Recognition Particle (SRP) receptor from Escherichia coli BL21

 Score = 81.6 bits (200), Expect = 6e-20
 Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 15/188 (7%)

Query: 284 VVALLGPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVR 343
           V+ ++G  GVGKTTT+ KLA +   E    +V L   DT+R  A EQL ++G+    PV 
Sbjct: 296 VILMVGVNGVGKTTTIGKLARQ--FEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVI 353

Query: 344 VAKDSNELADVIY------QLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESG----ETI 393
                 + A VI+      + RN  +++ DTAG  Q    L E+L  +++       E  
Sbjct: 354 AQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAP 413

Query: 394 HSYLVL--PATAQRKVLQETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYI 451
           H  ++    +T Q  V Q  + H   + L+G  +TKLD     G   SV  Q  +P+ YI
Sbjct: 414 HEVMLTIDASTGQNAVSQAKLFH-EAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYI 472

Query: 452 ANGQRVPE 459
             G+R+ +
Sbjct: 473 GVGERIED 480