Pairwise Alignments

Query, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., Signal recognition particle 54 kDa protein from Azospirillum sp. SherDot2

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 12/238 (5%)

Query: 233 LERMGVSLEMADQL---ACYIPEETPPPKAWKALLGLVS-DQIPVVKHDILKRGGVVALL 288
           L+R GV   +A+QL   A  +  E P      AL    + + +P  +  +      +AL+
Sbjct: 85  LQRHGVPASLAEQLIDAASGLDTEDPRLALGSALDSYFTFNPLPDGRSPVKP----LALV 140

Query: 289 GPTGVGKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDS 348
           GP G GKT   AKLAARA     S  V ++TTDT R G  +QL+ + R+M   +   +D 
Sbjct: 141 GPPGSGKTLVAAKLAARAVFRKCS--VGVITTDTVRAGGVDQLAAFTRLMKLKLATVEDP 198

Query: 349 NELADVIYQLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVL 408
           + LA      R   L+LVDTAG    D    + L  ++  S   +   LVLPA       
Sbjct: 199 DALAGAFEVHRRTDLVLVDTAGRNPFDAEDMQDLRAML--SAGEVEPILVLPAGLDALEA 256

Query: 409 QETIEHFRRIPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQP 466
            +    F+ + +   ++T+LD    LG  +++  +  L     +   +V E +    P
Sbjct: 257 ADMAMAFKAVGVRRMLVTRLDIARRLGSVLAIAARARLSFCDASISSKVAEGLTALNP 314



 Score = 44.3 bits (103), Expect = 8e-09
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 1  MKIKRFFAKDMKTALLQVKEELGVDAVIMSNK-KVAGGVEIVAAV-DGDTAPAPA 53
          M++K F AK M  A+  V++ LG DA+I++ + +  GGV + AAV + D  PAPA
Sbjct: 1  MRLKSFHAKTMSDAMRMVRQSLGDDAIIVATREEEGGGVRVTAAVEEDDLPPAPA 55