Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., chemotaxis protein CheA from Rhodanobacter sp000427505 FW510-R12

 Score =  412 bits (1058), Expect = e-119
 Identities = 243/551 (44%), Positives = 335/551 (60%), Gaps = 28/551 (5%)

Query: 234 GDITDDEFEKLLDQLHGK----GKGPSIETAAPA---APVTPSTPKATETPKPAAAKSAP 286
           G +  D     LD L+G     G    ++   PA   A +  + P A   P P  A  A 
Sbjct: 85  GAVQMDALLHALDLLNGMMAAVGAAAPLQMPPPALLAALLPEARPVAVAAPAPPVA--AA 142

Query: 287 GGDDLMTDEEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPA 346
           GG   + D EFE LLD ++G+    +V    +   P AS+  + D     E  A      
Sbjct: 143 GGS--IDDSEFEALLDSMYGNAAPGAVAPAPLPAAPPASATRTID---DDEFEALLDTLH 197

Query: 347 AKPVAKPAAAKPAVAKEEPAKAPAPAA--VKDSDESREVAAAGGAKKAQTESTVRVDTST 404
            KP  +PAA  PA     P   PAPAA     +  +   AAA     A  E++VRVDT+ 
Sbjct: 198 GKP-GQPAAPMPA-----PVAVPAPAAPGTPANAATTTPAAAPAHHAAPVENSVRVDTAR 251

Query: 405 LDTIMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVF 464
           LD ++N  GELVL+RNRLLSL      E ++ A   LD VT +LQGAVM  RMQP+ ++F
Sbjct: 252 LDLLVNHAGELVLLRNRLLSLAARHGSEALAAAANELDRVTDELQGAVMGMRMQPVGRLF 311

Query: 465 GRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERA 524
            RFPR+VRDLAR L K+++L L GE TDLD+ LVEALADPLIHL+RN++DHG+E+P ER 
Sbjct: 312 QRFPRIVRDLARQLGKDVELVLEGEGTDLDRGLVEALADPLIHLLRNALDHGVELPAERE 371

Query: 525 KNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKEC 584
           + GK R G+V LSASQ G+ I +A+ DDG GMDP+ LR  AV++G++D   A RL+  EC
Sbjct: 372 RAGKPRKGRVCLSASQRGERIVIAVRDDGRGMDPEILRRKAVEKGVIDAVQAARLSEAEC 431

Query: 585 FNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLA 644
           + LIF PGFS+   ++DISGRGVGMDVVKT +  L G++ + S +G G+++ + VPLTLA
Sbjct: 432 YELIFRPGFSTAAVVSDISGRGVGMDVVKTRVAELGGTLQVRSQLGHGSELELTVPLTLA 491

Query: 645 ILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPK 704
           +L  LMV V    FALPL +V E+F LD  +  ++DG+L    R +++PL  L  W    
Sbjct: 492 VLRVLMVRVDTRLFALPLGNVAEVFELDAGQDCLLDGRLVARHRGRALPLLDLTGWAGAP 551

Query: 705 KGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDG 764
               +      HVV++ IG +R+G +V  ++G+E+V++KPL  L  G PG++GAT+T DG
Sbjct: 552 AAAGR------HVVVLHIGHRRLGCLVHEVLGREDVIVKPLGPLFGGVPGIAGATVTGDG 605

Query: 765 HIALILDVPDL 775
            +AL++D+  L
Sbjct: 606 RLALVMDLASL 616



 Score =  165 bits (418), Expect = 6e-45
 Identities = 116/285 (40%), Positives = 140/285 (49%), Gaps = 55/285 (19%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           M  ELD ++ QDFLVEAGE+L+ L EQLV LE  P D +LLNA+FR FHTVKGGAGFLAL
Sbjct: 1   MDAELDNELRQDFLVEAGELLQRLDEQLVGLEAAPGDGELLNAVFRAFHTVKGGAGFLAL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
             +V  CH AE++ +  RNG+  +    MD +L ALD +N    AV    PLQ   P LL
Sbjct: 61  EPMVLLCHHAEDLLNEARNGKLVLGAVQMDALLHALDLLNGMMAAVGAAAPLQMPPPALL 120

Query: 121 DELHRLSKPASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSG 180
             L   ++P +                                         V A A   
Sbjct: 121 AALLPEARPVA-----------------------------------------VAAPAPPV 139

Query: 181 VIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITDDE 240
               GSIDD    EFE LLD ++G   APGA +P    +AP  +A+ T  D       DE
Sbjct: 140 AAAGGSIDD---SEFEALLDSMYGNA-APGAVAPAPLPAAPPASATRTIDD-------DE 188

Query: 241 FEKLLDQLHGKGKGPSIETAAPA---APVTPSTPKATETPKPAAA 282
           FE LLD LHGK   P+    AP    AP  P TP    T  PAAA
Sbjct: 189 FEALLDTLHGKPGQPAAPMPAPVAVPAPAAPGTPANAATTTPAAA 233