Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 2032 a.a., Hpt domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  187 bits (476), Expect = 4e-51
 Identities = 105/342 (30%), Positives = 186/342 (54%), Gaps = 17/342 (4%)

Query: 444  VTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALAD 503
            V+ +LQ  +++TRM P   +     R +R  A+  +K   L + G   ++D+NL++ +  
Sbjct: 1544 VSTELQDGLLRTRMLPFDTMVPNLRRTLRQAAQEQDKHAQLHVDGAHGEMDRNLLDRIKA 1603

Query: 504  PLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRG 563
            P  H++RN++ HGIE P ER K GK   G V ++ ++E   + + + DDG G++ + +R 
Sbjct: 1604 PFEHMLRNAIAHGIETPAERRKAGKPVEGVVSITVAREATEVVIRVSDDGRGLNREAIRK 1663

Query: 564  IAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSI 623
              ++RG++  +   R T+ +  +LI   GFS+  ++T ++GRGVGMDVV   I  L GS+
Sbjct: 1664 RGIERGLLRPE--TRPTDNQLLSLITQTGFSTASQVTQLAGRGVGMDVVANEIKQLGGSL 1721

Query: 624  DIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQL 683
             I+S  GKGT   +++P TLA+   ++V +    FA+P+ SV  +         V   +L
Sbjct: 1722 SIESEEGKGTTFILRLPFTLAVTQAILVRIGEATFAIPITSVQGV-------ARVNPDEL 1774

Query: 684  TIIVREKSIPLFY-LQNW----LAPKKG---KVQLRQGHGHVVIVQIGSQRVGLVVDTLI 735
            T ++ E      Y L+++    LA   G    +        +++ + G  R  + +D ++
Sbjct: 1775 TALMAEAEPSFQYGLEDYGIHDLAELLGLPPGLPTEDEQQPLLLTRAGDLRAAIRIDAVL 1834

Query: 736  GQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLK 777
            G  E+V+K +   +   PG+ GATI  DG + +ILD+  L++
Sbjct: 1835 GSREIVVKSVGPQISSVPGLLGATIMGDGSVLIILDLAPLVR 1876



 Score = 58.9 bits (141), Expect = 3e-12
 Identities = 83/379 (21%), Positives = 142/379 (37%), Gaps = 36/379 (9%)

Query: 19   EILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCHGAENVFDILR 78
            E+ + L      ++ + ++  +   + R  HT+ G    + +  L +     E +F  LR
Sbjct: 884  EVAQYLQTIRAAIQRSDDELPIGEELLRAVHTLHGAIAMVDIPLLTQLLSPLEGLFKRLR 943

Query: 79   NGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRLSKPASEDEDEAA 138
                 +S   +  + +A+D V+         EP  P    L  ++  L            
Sbjct: 944  AANLPLSSEGLRLLGQAVDVVDRVMSQFDAAEPQLPDADALTAQIASLR----------- 992

Query: 139  EAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSGVIDKGSIDDINEDEFEKL 198
                D   E  V  ++ E   D  +EA         ++ S+G  D+    D  E     +
Sbjct: 993  ----DRYPESKVAHVVFEPQADEADEA--------KSAESAGATDEADEADEAEAYQAII 1040

Query: 199  LDEL-HGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITDDEFEKLLDQLHG--KGKGP 255
             D L  G   A  A++  APA APA A  +    L      +   +L+  L      +  
Sbjct: 1041 ADSLAAGMADAAAARAGTAPADAPANAGEIPQVHLEDAQHAELTAELVAALGAFEPERAD 1100

Query: 256  SIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFEKLLDELHGSGKGPSVEE 315
            +   AA       +     E  K AA ++A          E EKL  E   + +    E 
Sbjct: 1101 AERAAAEKLAAEQAAAARAEAEKLAAEQAA------TAQAEAEKLAAEQAATAQ---AEA 1151

Query: 316  LEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPAPAAVK 375
             ++A    A++ V ++ K +AE +A +   A K  A+ AAA  A A++   +  A A   
Sbjct: 1152 EKLAAEQAAAAQVEAE-KLAAEQAAAAQAEAEKLAAEQAAAAQAAAEKLAIEQAAAAQAA 1210

Query: 376  DSDESREVAAAGGAKKAQT 394
               ++ E AAAG   +  T
Sbjct: 1211 AEKQAAEQAAAGRTSEEAT 1229



 Score = 45.1 bits (105), Expect = 4e-08
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 35/211 (16%)

Query: 2    SYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALS 61
            S ++D D+++ F+ EA EIL+   + L +    P +   +  + R  HT+KGGA    L+
Sbjct: 1243 SGQIDADLMEVFIDEAREILDHADDVLAQWHAEPAELVHVPELQRDLHTLKGGARIAGLT 1302

Query: 62   ELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLD 121
             + +  H  E + +                         E  R V    PL  A     D
Sbjct: 1303 AVGDLSHAIETLLE-------------------------EPIRDVSRTGPLIAALEASFD 1337

Query: 122  ELHRLSKPASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSGV 181
            +LH L +         A+    E    +++ ++E   E V+ +   +    + A AS   
Sbjct: 1338 QLHALVQ-------RVAQGQATEYPRAMIDHLLELAGETVLAD---DATAAMPAPASVPT 1387

Query: 182  IDKGSIDDINEDEFEKLLDELHGKGKAPGAQ 212
                ++    E    +L+ E   + ++P  Q
Sbjct: 1388 ASSPAVSAAGEPGLPELMPEAEEEVRSPQEQ 1418



 Score = 40.8 bits (94), Expect = 8e-07
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 21/162 (12%)

Query: 355  AAKPAVAKEEPAKAPAPAAVKDSDESREVAAAG--GAKKAQTEST---------VRVDTS 403
            A +  +A +  A  PAPA+V  +  S  V+AAG  G  +   E+          +RV   
Sbjct: 1366 AGETVLADDATAAMPAPASVPTAS-SPAVSAAGEPGLPELMPEAEEEVRSPQEQIRVRAD 1424

Query: 404  TLDTIMNMVGELVLVRNRLLS--LGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIK 461
             LD ++N  GE+ + R+RL     G   N  E+ + VA L    + L+   ++T  Q   
Sbjct: 1425 LLDNLVNHAGEVAIYRSRLEQQVAGYRFNLVELEQTVARL---RSQLRMLEIETEAQ--- 1478

Query: 462  KVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALAD 503
             +  RF R  R+   +    ++L+   +     + L E+++D
Sbjct: 1479 -IIARFQREHREAGMAAFDPLELDRYSQLQQYSRALAESVSD 1519



 Score = 33.9 bits (76), Expect = 9e-05
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 15/191 (7%)

Query: 5   LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
           +D+DI + FL E  E ++ L         +P     L  I R FHT+KG    +    L 
Sbjct: 686 IDDDIREIFLEEMQEEIDNLRSAEQLWLADPAQSAALVGIRRSFHTLKGSGRLVGAGVLG 745

Query: 65  ETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQ-EREPLQPADPELLDEL 123
           E     E++ + + +G      ++   +  A+D + +   A++ E  P  P    +    
Sbjct: 746 EFAWKVEDMLNRVLDGTIQPDENVQALVRHAIDALPQLLAALKGEGMPRAPLGAIMHTAE 805

Query: 124 HRLSKPASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSGVID 183
              +   +  ED A  A               E V  +V   VP ++    +  ++G+  
Sbjct: 806 QLAAGNPAWVEDHAPRA--------------METVRRIVRRRVPRLDAAAESIPTAGLAG 851

Query: 184 KGSIDDINEDE 194
            G+  +  E E
Sbjct: 852 VGAAPEPIEPE 862