Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  849 bits (2193), Expect = 0.0
 Identities = 477/782 (60%), Positives = 567/782 (72%), Gaps = 51/782 (6%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS+  DE+ILQDFLVEAGEILE LSEQLVELE+ P+D +LLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
            ELVE CH AENVFDILR G+RHV   LMD +L+ALD VN  F  V+ER P+  A PELL
Sbjct: 61  HELVECCHIAENVFDILRKGERHVDSELMDVILEALDAVNGMFSEVRERAPITAATPELL 120

Query: 121 DELHRLSKPASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSG 180
             L R ++PA       AEA   EP  E   ++ +   E ++  ++  V+ E  A A++ 
Sbjct: 121 AALARYAEPADLSAAPVAEAA-PEPVAEAEPDVTDSEFEQLLN-SLSAVKAEAEAPAAA- 177

Query: 181 VIDKGSIDDINEDEFEKLLDELHGKGK-APGAQSPQAPASAPAKAASVTNSDLNGDITDD 239
            +   + +DI + EFE LLD+LHGKG+ A  A +P A + APA       ++ N DITDD
Sbjct: 178 -VAAPTSEDITDAEFESLLDQLHGKGQFAADAVTPAAVSEAPA----APTANANTDITDD 232

Query: 240 EFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFEK 299
           EFE LLDQLHGKG        A A P   +T  A     PAAA +AP GD L++D EFE 
Sbjct: 233 EFEALLDQLHGKGT-----FVADALPEVAATAAA-----PAAASAAPAGDGLISDHEFES 282

Query: 300 LLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPA 359
           LLDELHG GK     E+  A     ++PV+  AKA+A A AP+ KPA  P A PA A+ A
Sbjct: 283 LLDELHGKGK---FSEVAPAATVATAAPVA--AKAAAPAPAPAAKPA--PAAAPAPARAA 335

Query: 360 VAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVR 419
            A         P A K + E+              E+TVRVDT+ LD IMNMVGELVLVR
Sbjct: 336 AA---------PVADKPASEA--------------ETTVRVDTARLDDIMNMVGELVLVR 372

Query: 420 NRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLN 479
           NRL+ LGL+S DE M KAV+NLDVVTADLQ AVMKTRMQPIKKVFGRFPR+VRDLAR L 
Sbjct: 373 NRLVRLGLSSGDEAMQKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLK 432

Query: 480 KEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSAS 539
           KEI+LEL GEETDLDKNLVEALADPL+HLVRN+VDHG+E P+ER  +GKSR GKVIL+A 
Sbjct: 433 KEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGVETPEEREASGKSRNGKVILAAE 492

Query: 540 QEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKI 599
           QEGDHI L+I DDG GMDP  LR IAVKRG+MD+DAA+RLT+ EC+NLIF PGFS+K +I
Sbjct: 493 QEGDHILLSITDDGKGMDPAILRNIAVKRGVMDKDAADRLTDSECYNLIFAPGFSTKTEI 552

Query: 600 TDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFA 659
           +D+SGRGVGMDVVKT I+ LNGSI+I ST G+G+KI IKVPLTLAI+PTLMV +    FA
Sbjct: 553 SDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFA 612

Query: 660 LPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVI 719
            PL +VNEIFHLDL RTNVVDGQ  +IVR+K++PLFYL+ WL       + R+  GHVVI
Sbjct: 613 FPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVASAKHEEQRE--GHVVI 670

Query: 720 VQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLKQY 779
           + +G+QR+G VVD L+GQEEVVIKPL K+LQGTPGMSGATIT DG IALILDVP +LK+Y
Sbjct: 671 LSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLKRY 730

Query: 780 AA 781
           AA
Sbjct: 731 AA 732