Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., Signal transduction histidine kinase CheA from Sphingobium sp. HT1-2

 Score =  258 bits (659), Expect = 9e-73
 Identities = 156/417 (37%), Positives = 238/417 (57%), Gaps = 12/417 (2%)

Query: 363 EEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRL 422
           E PA   APAA  + +E     AA   ++ Q   T+R+  S +D +MN V ++VL RN L
Sbjct: 123 EAPA---APAAEAEPEEPAVPVAA--VRQGQALRTIRLPLSLIDQLMNGVSDMVLARNEL 177

Query: 423 L-SLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKE 481
              L   S D E+  A   L    AD++  + KTRMQ ++++F   PR+VRDL+R L+K 
Sbjct: 178 SRKLRDRSADPELDSAFERLSTCVADMRDVISKTRMQRVERLFAAMPRMVRDLSRDLDKR 237

Query: 482 IDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQE 541
           I+L L G + ++D+ +VE + DPL H+VRNS+DHGIE P+ R   GK   G++ L A Q 
Sbjct: 238 IELSLEGGDVEMDREMVEMVVDPLTHIVRNSIDHGIETPERRRAAGKPEAGRLRLEARQS 297

Query: 542 GDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITD 601
           G+ I + I DDGAG++  +L   A+  G +  DAA R+T ++  +LIF PG ++  K+T 
Sbjct: 298 GNQIVIEISDDGAGINTARLVEKAIAAGRLTPDAAARMTEQDKLDLIFQPGLTTAAKVTA 357

Query: 602 ISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALP 661
           +SGRGVGMDVV+  I  + G I +D+  G+G +IT++VPLTL I+P L+V   G  FA+P
Sbjct: 358 VSGRGVGMDVVRANIERIGGVIALDNHPGQGLRITLRVPLTLTIIPGLIVRAGGLHFAIP 417

Query: 662 LASVNEIFHLDLRRTNVVD--GQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVI 719
            A+V EI H +     + D  G     +R     +  L++ L   K +   + G   V++
Sbjct: 418 RAAVVEILHDNNEMMQIADVGGAKIATIRSIRHSMIDLEDVLGMDKPQ---QIGPRAVMV 474

Query: 720 VQIGS-QRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775
           V+  +     + V  +   EE+VI+P   L+  +   +G T+  +G   L+LD   L
Sbjct: 475 VRSATGVPFAMGVSAVENHEELVIRPASPLVMASGVYAGMTLPDNGKPMLLLDAAGL 531



 Score = 85.9 bits (211), Expect = 8e-21
 Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 5/140 (3%)

Query: 7   EDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVET 66
           +++LQ+F+ E  E LE L+ ++V  E NP D   L+AIFR FHTVKG  GFL L    + 
Sbjct: 2   DELLQEFISETQETLEALAGEVVAWEANPGDSQRLDAIFRFFHTVKGSCGFLNLPRFEKL 61

Query: 67  CHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPE-LLDELHR 125
            H AE+V   +R G R   P+ +  +L  +D + E   AV     L   + E L+  L +
Sbjct: 62  SHAAEDVLSEIRAGNRKPDPATVSAVLAIMDRIGELAEAVARGAALPNENDEYLIGALTQ 121

Query: 126 LSKPASEDEDEAAEAHFDEP 145
           +  PA+     AAEA  +EP
Sbjct: 122 VEAPAA----PAAEAEPEEP 137