Pairwise Alignments
Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056
Subject, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440
Score = 191 bits (485), Expect = 3e-52
Identities = 117/333 (35%), Positives = 180/333 (54%), Gaps = 7/333 (2%)
Query: 444 VTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALAD 503
V + LQ + T M P +++ R RVVR +A L K+++L + E +LD++++E +
Sbjct: 1164 VNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGELDRSVLERMVA 1223
Query: 504 PLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRG 563
PL H++RN+VDHG+E R GK G + L+ EG I + + DDGAG+ + +R
Sbjct: 1224 PLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRR 1283
Query: 564 IAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSI 623
A+KRG++D A +L++ E I PGFS+ EKIT ISGRG+GMDVV + L GS+
Sbjct: 1284 KAIKRGLLDPQA--QLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSM 1341
Query: 624 DIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHL---DLRRTNVVD 680
I+S GKG + I++P T++I LMV + +A+PL ++ I + +L +D
Sbjct: 1342 SIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQLD 1401
Query: 681 GQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHG-HVVIVQIGSQRVGLVVDTLIGQEE 739
+ + L YL L L Q V++V Q + D+L E
Sbjct: 1402 SPRYVYAGHE-YELRYLGELLQGLPRPALLGQSVPLPVLLVHSKEQSFAIQADSLSPSRE 1460
Query: 740 VVIKPLDKLLQGTPGMSGATITSDGHIALILDV 772
+V+K L G+SGAT+ DG + LILD+
Sbjct: 1461 IVVKSLGPQFAAVAGLSGATLLGDGRVVLILDL 1493
Score = 49.3 bits (116), Expect = 2e-09
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 7 EDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVET 66
E++L+ FL E+ +I+E + L + +P ++ + R HT+KG A + ++ + +
Sbjct: 888 EELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDL 947
Query: 67 CHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRL 126
H E ++++L G+ S L + D + AV+ +PL A L+D +
Sbjct: 948 AHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAA-TALIDYIRNF 1006
Query: 127 SKPASED 133
S A D
Sbjct: 1007 SSAALTD 1013
Score = 45.8 bits (107), Expect = 2e-08
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 5 LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
+D+++ Q FL EAGE+L + + + + R+ L + R HT+KG + +
Sbjct: 437 IDDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVA 496
Query: 65 ETCHGAENVFDILRNGQRHVSP 86
E GAE++ + + G+ +SP
Sbjct: 497 ELAWGAEHLLNRVLEGRSVLSP 518
Score = 39.3 bits (90), Expect = 2e-06
Identities = 76/353 (21%), Positives = 119/353 (33%), Gaps = 69/353 (19%)
Query: 6 DEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVE 65
D ++ FL A +IL L + P RD L+ + T+ A L ++ +
Sbjct: 714 DPQLVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDD 773
Query: 66 TCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHR 125
C +++ + G +A + + + V + + P PEL+D L
Sbjct: 774 VCEALLDLYGAVEEGSLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPR-PELVDRLRN 832
Query: 126 LSKPASEDE-------DEAAEAHFD-------------------EPEEELVEEIIEEVVE 159
L A + D H D EP E E EE++E
Sbjct: 833 LLDQALAPDATGLVGIDTVTPLHPDMDLSDTLGLPRPPLQPQVAEPLAEEPESPGEELLE 892
Query: 160 DVVEEAVPNVETEVTASASSGVIDKGSIDDINEDEFEKLLDELHG-KGKAPGAQ------ 212
+EE+ VE+ A A + D + E + L+ +LH KG A +
Sbjct: 893 VFLEESSDIVESAAAALA------RWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGD 946
Query: 213 -------------SPQAPASAPAKAASVTNSDLNGDITD--------DEFEKLLDQLHGK 251
+ + P SAP A D + D L+D +
Sbjct: 947 LAHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAATALIDYIRNF 1006
Query: 252 GKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFEKLLDEL 304
++AA P P+A PAAA GD + D E LLD+L
Sbjct: 1007 SSAALTDSAAGQGP-----PEAATAEIPAAAPERAPGDMVKVDAE---LLDDL 1051
Score = 26.9 bits (58), Expect = 0.009
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 372 AAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRL------LSL 425
AA + E+ A + V+VD LD + N+ GE ++R R+
Sbjct: 1015 AAGQGPPEAATAEIPAAAPERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQF 1074
Query: 426 GLNSND---EEMSKAVANLDVVT 445
LN + E M + LDV T
Sbjct: 1075 ALNEMETTLERMRDQLLRLDVET 1097