Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  863 bits (2229), Expect = 0.0
 Identities = 483/797 (60%), Positives = 579/797 (72%), Gaps = 60/797 (7%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS+  DE+ILQDFLVEAGEILE LSEQLVELE+ P+D DLLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
           +ELVE CH AENVFDILR G+R V   LMD +L+ALD VN  F  V+ER P+  A PELL
Sbjct: 61  NELVECCHIAENVFDILRKGERRVDAELMDVVLEALDAVNSMFSEVRERAPITAATPELL 120

Query: 121 DELHRLSKPASEDEDEAAEAHFDEPEEELVEEII------EEVVEDVVEEAVPNV----- 169
             L RL++P S DE  A+      P  E++EE++      +++ ++  E+ + ++     
Sbjct: 121 AALARLAEPQSADEAPAS------PVAEMIEELVVESDSSDDITDNEFEQLLDSLNAVKA 174

Query: 170 --ETEVTASASSGVIDKGSIDDINEDEFEKLLDELHGKGK-APGAQSPQAPASAPAKAAS 226
             E     +A + V D  + D+I + EFE LLD+LHGKG+ A  A +P APA+  A AA 
Sbjct: 175 QAEAPAAVAAPAQVADAAASDEITDAEFESLLDQLHGKGQFAVDAVAPAAPAAPAAPAAG 234

Query: 227 VTNSDLNGDITDDEFEKLLDQLHGKGKGP--SIETAAPAAPVTPSTPKATETPKPAAAKS 284
            ++     DITDDEFE LLDQLHGKG     ++E+A  +AP  P+ P A           
Sbjct: 235 DSS-----DITDDEFEALLDQLHGKGNFAVDALESAIASAPAAPAAPAA----------- 278

Query: 285 APGGDDLMTDEEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTK 344
           A  G DL++D EFE LLDELHG GK     +   AT   ASS  +  AKA A A+ P  K
Sbjct: 279 AAAGSDLISDHEFESLLDELHGKGKF----DASAATAGSASSVATPTAKAPAAAAVP--K 332

Query: 345 PAAKPVAKPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKA-QTESTVRVDTS 403
           PAAKP  K  A KPA A      APAPA        R  AAA   K A + E+TVRVDT+
Sbjct: 333 PAAKPEPKAEAPKPAAAA-----APAPA--------RAPAAAPAEKPASEAETTVRVDTA 379

Query: 404 TLDTIMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKV 463
            LD IMNMVGELVLVRNRL+ LGLNS DE MSKAV+NLDVVTADLQ AVMKTRMQPIKKV
Sbjct: 380 RLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKV 439

Query: 464 FGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDER 523
           FGRFPR+VRDLAR L KEI+LEL GEETDLDKNLVEALADPL+HLVRN+VDHGIE P+ER
Sbjct: 440 FGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIESPEER 499

Query: 524 AKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKE 583
             +GK+R G+V+L+A QEGDHI L+I DDG GMDP+ LR IAVKRG+MD+DAA+RL++ E
Sbjct: 500 EASGKARGGRVVLAAEQEGDHILLSISDDGKGMDPNVLRSIAVKRGVMDKDAADRLSDTE 559

Query: 584 CFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTL 643
           C+NLIF PGFS+K +I+D+SGRGVGMDVVKT I+ LNGSI+I ST G+G+KI IKVPLTL
Sbjct: 560 CYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTL 619

Query: 644 AILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAP 703
           AI+PTLMV +    FA PL +VNEIFHLDL  TNVVDGQ  +IVR+K++PLFYL+ WL  
Sbjct: 620 AIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSTTNVVDGQEVVIVRDKALPLFYLKRWLVS 679

Query: 704 KKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSD 763
                + R+  GHVVI+ +G+QR+G VVD L+GQEEVVIKPL K+LQGTPGMSGATIT D
Sbjct: 680 SAAHEEQRE--GHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGD 737

Query: 764 GHIALILDVPDLLKQYA 780
           G IALILDVP +LK+YA
Sbjct: 738 GRIALILDVPSMLKRYA 754