Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 1974 a.a., Signal transduction histidine kinase CheA (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  176 bits (446), Expect = 1e-47
 Identities = 104/340 (30%), Positives = 182/340 (53%), Gaps = 8/340 (2%)

Query: 445  TADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADP 504
            T +LQ  +++TRM   + +  R  RVVR  ++   K++ L++ G   ++D+ +++ +   
Sbjct: 1483 TRELQRDLLRTRMVEFEGISERLYRVVRQASKETGKQVRLDITGGNIEMDRGVLDRMTAA 1542

Query: 505  LIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGI 564
              HL+RNSV HGIE+P+ R + GK   G++ +    E + + L   DDGAG+D  +LR  
Sbjct: 1543 FEHLLRNSVAHGIEVPERRQQAGKPAEGQIEIVLGHELNDVSLVFTDDGAGLDLVRLREK 1602

Query: 565  AVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSID 624
               +G++      +L+++E   L+F PG S+  ++++++GRG+GMDVV+  +  L G I+
Sbjct: 1603 GQAQGLI--PPGTQLSDEEAAQLVFEPGISTAREVSELAGRGIGMDVVRNDVVALGGRIE 1660

Query: 625  IDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHL---DLRRTNVVDG 681
              +  G+GT   + +PLT A+   +M+   G    +P   V  +  L   DL +     G
Sbjct: 1661 TATQAGQGTSFKLVLPLTTAVTQVVMLRAGGLTVGVPSNLVEVVRRLGNEDLAKA-YASG 1719

Query: 682  QLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVV 741
             L   V  + +P ++    L       ++      VVI +  +QRV L VD ++G +EVV
Sbjct: 1720 HLN--VAGEDVPFYWSGALLQSSPRSTEVHGRTQPVVIFRSAAQRVALHVDEVLGNQEVV 1777

Query: 742  IKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLKQYAA 781
            +K L   L   PG++G ++ + G +ALI +   L   Y A
Sbjct: 1778 VKNLGSQLSRLPGLAGMSVLASGAVALIYNPVALSTVYGA 1817



 Score = 50.1 bits (118), Expect = 1e-09
 Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 15/184 (8%)

Query: 6   DEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVE 65
           ++D+L  FL EA E++    E +  L+  P D + L  + R FHT+KG +  + L E  E
Sbjct: 694 EDDLLDIFLEEAREVVANGLEAVSHLQVQPSDLEHLTTLRRAFHTLKGSSRMVGLDEFGE 753

Query: 66  TCHGAENVFDILRNGQRHVSPSLMDTMLKAL-------DTVNEQFRAVQEREPLQPADPE 118
                E + + +   QR  SP L+    +A+       D ++ + RAV  R     A  E
Sbjct: 754 AAWAMEQLLNTVLAEQRPASPPLLTLAGEAMTEFGRWVDDISAR-RAVPWRSLPFRASAE 812

Query: 119 LLDELHRLSKPASEDEDEAAEAHFDEPEEELVEE---IIEEVVEDVVEEAVPNVETEVTA 175
            L +  +    AS D +    A    P E  V E     E  V D V  A P+ + ++ A
Sbjct: 813 ALRDQGQYLPLASPDVEATVSA--PVPLEAAVYEPPPTEEAPVADAV--AAPSFDLDLDA 868

Query: 176 SASS 179
            A++
Sbjct: 869 VAAA 872



 Score = 38.1 bits (87), Expect = 5e-06
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 5    LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
            +D D+   F  EA E++  L   L +    P++      + R  HT+KG A       L 
Sbjct: 1197 VDVDLFPIFAEEAQELIPQLDGALRQWVARPDNGSARAEVLRNLHTLKGSARLAGALRLG 1256

Query: 65   ETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLD 121
            E  H  E   +  R G      + ++ +  A D ++ +F      E L+ AD +++D
Sbjct: 1257 EMAHRMETAAE--RLGSDLQRGADLEALQTAFDAISARF------EQLRNADAQIID 1305