Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  202 bits (515), Expect = 4e-56
 Identities = 104/344 (30%), Positives = 197/344 (57%), Gaps = 10/344 (2%)

Query: 447 DLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLI 506
           DLQ  V + RM P + +FG F ++VRDLAR++ K++ +++ G + + D+ +++ L DP++
Sbjct: 296 DLQQEVRQVRMVPAESIFGAFRKMVRDLARAVGKQVTVQVSGLDVEADRMVLQGLKDPVM 355

Query: 507 HLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAV 566
           HL+RN++ HG+E PDER   GKS    V LS       + + I DDG G++ + +R  AV
Sbjct: 356 HLLRNALSHGVEPPDERRAEGKSPAAHVSLSFDVSEGRLVVTIEDDGRGVNFEAIRRKAV 415

Query: 567 KRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDID 626
           +RG+  E  +  +  +   ++IF PGFS+   + D+SGRG+G+ VV+ A+  +NG++++ 
Sbjct: 416 ERGLFSEAQSFDVDRQSLIDVIFDPGFSTARVVDDLSGRGMGLSVVREAMAMMNGTVEVQ 475

Query: 627 STMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTII 686
                GT   + +PLT++     +V   GH + LP   V+ ++ +       V+G+  + 
Sbjct: 476 DRKPMGTCFRLSLPLTVSTQRLFLVECQGHVYGLPTEGVDRLYRVRAEDVGTVEGKSVVF 535

Query: 687 VREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLD 746
           + ++ IPL  L + LA  +  V++ +    +V+++ G +RV + +D  +   E ++K + 
Sbjct: 536 LGDRQIPLLSLAHLLALGESAVKVTRNVVPLVVLKNGERRVAVAIDGFLSIREGLVKDI- 594

Query: 747 KLLQGTPG-----MSGATITSDGHIALILDVPDLLKQYAAASRV 785
               G PG     ++G  +  DG IAL+L+  ++++ +  +  +
Sbjct: 595 ----GVPGARGTMVAGGVLLEDGDIALVLNPFEIVETFRKSGSI 634



 Score = 45.8 bits (107), Expect = 9e-09
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 7   EDILQDFLVEAGEILELLSEQLVELENNPEDRDL--LNAIFRGFHTVKGGAGFLALSELV 64
           E +LQ F +E  E +E +   L  LE+  E   L  L+ IFR  H++KG +  + L  + 
Sbjct: 6   ERLLQAFQIEYREHVEAIRTLLDGLEHKAEGSGLAQLDEIFRRAHSLKGASRAVDLPAVE 65

Query: 65  ETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPL 112
           E  H  E +F  +R+GQ  +   +   +   LD + +   A    EPL
Sbjct: 66  EISHRMETLFAKVRSGQAKLDHDMAIGLGHVLDVIEDWVAANLANEPL 113