Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) from Escherichia coli BW25113

 Score =  280 bits (716), Expect = 2e-79
 Identities = 167/405 (41%), Positives = 243/405 (60%), Gaps = 18/405 (4%)

Query: 382 EVAAAGGAKKAQT----EST-VRVDTSTLDTIMNMVGELVLVRNRLLSLGLNS---NDEE 433
           E A  G  ++ +T    EST +RV    +D ++N+VGELV+ ++ L          N  +
Sbjct: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302

Query: 434 MSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDL 493
           +  ++  L     DLQ +VM  RM P++ VF R+PR+VRDLA  L K+++L L G  T+L
Sbjct: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362

Query: 494 DKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDG 553
           DK+L+E + DPL HLVRNS+DHGIE+P++R   GK+  G +ILSA  +G +I + + DDG
Sbjct: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422

Query: 554 AGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVK 613
           AG++ +++   A  +G+     +  +++ E   LIF PGFS+ E++TD+SGRGVGMDVVK
Sbjct: 423 AGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479

Query: 614 TAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDL 673
             I  + G ++I S  G GT I I +PLTLAIL  + V VA   F LPL +V E   L  
Sbjct: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME--SLQP 537

Query: 674 RRTN---VVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLV 730
           R  +   +  G+  + VR + +P+  L  W        +     G VVI+Q G +R  L+
Sbjct: 538 READLHPLAGGERVLEVRGEYLPIVEL--WKVFNVAGAKTEATQGIVVILQSGGRRYALL 595

Query: 731 VDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775
           VD LIGQ +VV+K L+   +  PG+S ATI  DG +ALI+DV  L
Sbjct: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640



 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 8   DILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETC 67
           D  Q F  EA E+L  + + L+ L+    D + LNAIFR  H++KGGAG    S L ET 
Sbjct: 7   DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66

Query: 68  HGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAV-QEREPLQPADPELLDELHRL 126
           H  EN+ D  R G+  ++  +++  L+  D + EQ  A  Q +EP   +   +   L +L
Sbjct: 67  HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126

Query: 127 SKPASEDEDEA----AEAHFDEPEEE---------LVEEIIEEVVEDVVEEAVPNVETEV 173
           +  A  +   A    +     EP++E         ++   ++    D++EE + ++ T  
Sbjct: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186

Query: 174 TASASSGVIDKGSIDDINEDEFEKLL 199
                +  +      DI ED+   +L
Sbjct: 187 DVVKGADSLSAILPGDIAEDDITAVL 212