Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., Gliding motility regulatory protein from Alteromonas macleodii MIT1002

 Score =  164 bits (415), Expect = 1e-44
 Identities = 134/490 (27%), Positives = 229/490 (46%), Gaps = 39/490 (7%)

Query: 297 FEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAA 356
           FE  L EL  S K  S ++L  A + + +     ++  S E   P     +K + +    
Sbjct: 71  FESFLSELKKSDKLISKDDLATALKNLTALKRLRNSN-SGEQILPKDNDLSKSLQQD--- 126

Query: 357 KPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELV 416
                +EE  ++    AV  ++ES  + +          S +++  S+ ++++  +G++ 
Sbjct: 127 -----EEETQRSLVRGAVNYANESIRLPSFILDDLLANTSELKLLVSSGNSVLENIGKVE 181

Query: 417 LVRNRLLSLG--------------LNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKK 462
            V + L +                L+S  E+  K  + L      L+  V+K+R++PI  
Sbjct: 182 KVLSHLCTSNRTEAIQDIDKASKMLSSLKEQTKKISSELQNRLKTLEKVVLKSRLKPISD 241

Query: 463 VFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDE 522
                   V+   RS  + ++ E RG     D+ +VE L   L+HL RNS++HG E   E
Sbjct: 242 AC----EPVQAFLRSEERTVNFEARGVHHSTDRYIVERLTTVLMHLARNSIEHGFEDTQE 297

Query: 523 RAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNK 582
           R + GK+   K+ +   +EG +I+L   DDG G+D D+LR   V  G +       L + 
Sbjct: 298 RVRQGKAPHCKIEIEVRKEGRNIRLLYADDGKGIDRDRLRKAIVGLGDVS------LNDD 351

Query: 583 ECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLT 642
              N++F PG S+ EK++ +SGRGVG+  V+ AI+ + GSI ++ST G G +  + +P  
Sbjct: 352 INLNVLFQPGVSTSEKVSKVSGRGVGLYAVQCAISEMRGSIAVESTPGNGIQFDLVIPQD 411

Query: 643 LAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLA 702
           LA    L+  VA    A+    +     L             I +  K+ P+  L     
Sbjct: 412 LANFDVLIATVADTNIAIDPNHIEYTCSLPSSYKYKNVHNHLIEIEGKTYPIIELPPIFI 471

Query: 703 PKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITS 762
              GK  L +     ++++  S +  L+VD LIG E V+++ L + +  +PG+SGA I  
Sbjct: 472 ---GKATLAKA---AIVLKHNSHKYVLIVDQLIGLESVIVRTLFEQIGESPGLSGAAIRD 525

Query: 763 DGHIALILDV 772
              IAL++DV
Sbjct: 526 GRDIALLIDV 535



 Score = 63.2 bits (152), Expect = 5e-14
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 8/133 (6%)

Query: 4   ELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSEL 63
           EL + +++ F +E  E L+++SE +  ++ N  D D LN +FR  H++KG A  +  S++
Sbjct: 5   ELQKRLIETFHLEMDEHLQVMSEVIPGMKFNSRDEDKLNLLFRAAHSLKGAARSVGNSQV 64

Query: 64  VETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDEL 123
            + CH  E+    L+   + +S   + T LK L T  ++ R     E + P D +     
Sbjct: 65  EDICHVFESFLSELKKSDKLISKDDLATALKNL-TALKRLRNSNSGEQILPKDND----- 118

Query: 124 HRLSKPASEDEDE 136
             LSK   +DE+E
Sbjct: 119 --LSKSLQQDEEE 129