Pairwise Alignments

Query, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., CheW-like protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  129 bits (325), Expect = 7e-35
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 24/263 (9%)

Query: 79  PVADLDLEQ--ILEENTAKI---AKIDP----VVQPCSVVEEIQEWEIETSYVEPDIETP 129
           PV+ +D  Q  +LEE        A+I P    V  P +V  E+Q      +   P +E  
Sbjct: 42  PVSSIDEFQAAVLEEQAFDARMQAQIKPLAVAVAAPAAVAVEVQ-----VAAPAPVVEVA 96

Query: 130 ESVIEDDLEPESVDTEAEREIAIETSIEEPVAEVPVVEAQAVPETQAGRNKLGTWTNTIR 189
             ++ + ++   VD     E     ++ EPVAE+  + AQ  P      +    W     
Sbjct: 97  PVIVAEAVQ---VDVAQVEEAVPTVALVEPVAELSTLAAQRTPTPPPTSDGRPAWA---- 149

Query: 190 EKDFQVLYFDVNGVTFAVPLDELGGIHRMT--TLNHLIGRPAWYLGLQTNRDSQLDVVDT 247
            + F+ L FDV G+T AVPL  LG I+ +    L  L G+P W+LG+   +   L V+DT
Sbjct: 150 AEPFECLLFDVAGLTLAVPLVCLGSIYPLAGQELTPLFGQPDWFLGILPCQAGNLKVLDT 209

Query: 248 AKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLA 307
           A+W+M ++ RD+ ++Q  QY++ +    WGLA  Q+  +  L   +++WR Q G RPWLA
Sbjct: 210 ARWIMPDRYRDD-FRQGLQYVISVQGYEWGLAVHQVSRSLRLDPNEIKWRAQRGHRPWLA 268

Query: 308 GMVKEKMCALIHVQALIAMLNAG 330
           G V E MCAL+ V  L  ++ +G
Sbjct: 269 GTVIEHMCALLDVAELAELIASG 291