Pairwise Alignments

Query, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., CheW domain protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 13/197 (6%)

Query: 142 VDTEAEREIAIETSIEEPVAE--VPVVE----AQAVPETQAGRNKLGTWTNTIREKDFQV 195
           V+ E   E +I   +EE   E  VP+V+    A  +P   A  +    W      + F+ 
Sbjct: 97  VEQEVVAEASIPVLVEEQTVEPAVPLVDVHLPAPNLPVPPATVDGRPVWA----AEPFEC 152

Query: 196 LYFDVNGVTFAVPLDELGGIHRMT--TLNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMA 253
           L FDV G+T AVPL  LG I+ +    L  L G+P W+LG+ T +   L V+DTA+WVM 
Sbjct: 153 LLFDVAGLTLAVPLVCLGSIYTLAGQELTPLFGQPDWFLGILTCQAGNLKVLDTARWVMP 212

Query: 254 EKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEK 313
           ++ RD+ ++Q  QY++ +    WGLA  Q+  +  L   +++WR Q G+RPWLAG V E 
Sbjct: 213 DRYRDD-FRQGLQYVISVQGYEWGLAVHQVSRSLRLDPSEIKWRSQRGQRPWLAGTVIEH 271

Query: 314 MCALIHVQALIAMLNAG 330
           MCAL+ V AL  ++ +G
Sbjct: 272 MCALLDVAALAELIASG 288