Pairwise Alignments

Query, 164 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 49/158 (31%), Positives = 101/158 (63%), Gaps = 4/158 (2%)

Query: 1   MSQANEVKVRKEKSNDEVLQWVTFQLEEETYGINVMQVREVLRYTE-IAPVPGAPDYVLG 59
           MS  ++V + ++ + D  +Q V F+L++E +GI++  V+E++R  E I+ VP   D++ G
Sbjct: 353 MSTIDDVSILEDDNTD--MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEG 410

Query: 60  IINLRGNVVTVIDTRSRFGLMQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEID 119
           +INLRGNV+ ++D R RF L +    +  RI+V+  E+   G +VDSV+EV+ +  S+++
Sbjct: 411 VINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLE 470

Query: 120 STPSVGTDESSKFIQGVSNRDGKLLILVDLNKFLTDEE 157
             P V ++E ++ ++ + N   +++ ++  ++ +++ E
Sbjct: 471 DAP-VLSEEQAQLMRQMVNLSPRMIGVLSADQLISNTE 507



 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 5   NEVKVRKEKSNDEVL-QWVTFQLEEETYGINVMQVREVLRYTEIAPVPGAPDYVLGIINL 63
           +E  V  E  ++E L Q+V F L +E + +++ +V E++R      VP  P Y++G+ NL
Sbjct: 3   SEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNL 62

Query: 64  RGNVVTVIDTRSRFGLMQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEIDSTPS 123
           RG ++ V+  R+   + +   T+ TR+IVI   +  IG  VD V  V       I  T +
Sbjct: 63  RGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNT 122

Query: 124 VGTDESSKFIQGVSNRDGKLLILVDLNKFLTDEEWDEM 161
            G       I    + D +++ +++ ++ L +   +E+
Sbjct: 123 AGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEEL 160



 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 7/123 (5%)

Query: 9   VRKEKSNDEVL-QWVTFQLEEETYGINVMQVREVLRYTEI-APVPGAPDYVLGIINLRGN 66
           + +E+ +DE + Q V   ++ + Y   +   +E++R  EI   VP     +LG+INLRG 
Sbjct: 180 IDEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGK 239

Query: 67  VVTVIDTRSRFGLMQGEITDNTRIIVI-----ESERQVIGILVDSVAEVVYLRSSEIDST 121
            + ++  R+ FGL     +D+ R++V+     E ER  +G++VD+V EV+ L    +DS 
Sbjct: 240 TLPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSV 299

Query: 122 PSV 124
           P +
Sbjct: 300 PEI 302