Pairwise Alignments

Query, 207 a.a., cytochrome c biogenesis ATP-binding export protein CcmA from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 11/199 (5%)

Query: 1   MLEVKNLTAIRDERILFESLSFEIHAGELVQIEGRNGTGKTTLLRIIAGL---GECECGE 57
           +LE+KN+T         +++   ++AGE+V + G NG+GK+TL++++ G+   G  E GE
Sbjct: 4   LLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYE-GE 62

Query: 58  ILWQRSKIQSD--RESYHQDLLFLGHQTGIKRELTALENLRFYLAVHQQTVDDPAIF--- 112
           I++   +IQ+   R++  + +  +  +  + +ELT LEN+     +    + D  +    
Sbjct: 63  IIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLR 122

Query: 113 --EALAKVGLAGREDVPVAQLSAGQQRRVALARLWLSKKPLWILDEPLTAIDKQGVSVLE 170
             + LA+V L+   D  V  L  GQQ+ V +A+    +  L ILDEP  ++ +Q  S+L 
Sbjct: 123 CQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILL 182

Query: 171 ALFLSHAQQGGIVILTTHQ 189
            +     Q G   I  +H+
Sbjct: 183 DIIRDLQQHGIACIYISHK 201



 Score = 43.9 bits (102), Expect = 5e-09
 Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 1   MLEVKNLTA---IRDERILFESLSFEIHAGELVQIEGRNGTGKTTLLRIIAGL--GECEC 55
           +L +++LTA   +         +SF +  GE++ I G  G G+T  ++ + G+  G+ E 
Sbjct: 258 ILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWE- 316

Query: 56  GEIL--WQRSKIQSDRESYHQDLLFLGHQ-----------TGIKRELTALENLRFYLAVH 102
           G+I    ++  I++ +++  Q +  +               G    L AL      ++  
Sbjct: 317 GKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQL 376

Query: 103 QQTVDDPAIFEALAKVGL-AGREDVPVAQLSAGQQRRVALARLWLSKKPLWILDEPLTAI 161
               +   I E++ ++ +     D+ + +LS G Q++  LAR  L    + ILDEP   I
Sbjct: 377 DDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGI 436

Query: 162 DKQGVSVLEALFLSHAQQGGIVILTTHQ 189
           D      +  L     QQG  VI+ + +
Sbjct: 437 DIGAKYEIYKLINQLVQQGIAVIVISSE 464