Pairwise Alignments

Query, 651 a.a., c-type cytochrome biogenesis protein CcmF from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., holocytochrome c synthetase from Pseudomonas putida KT2440

 Score =  733 bits (1892), Expect = 0.0
 Identities = 360/644 (55%), Positives = 465/644 (72%), Gaps = 3/644 (0%)

Query: 1   MIAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWA 60
           ++ E+G  A+I+++  A++ + +PL+GA R ++L M+ ARP AWG F  L+ +FA L  A
Sbjct: 6   VVPELGQLAMILAICFAVVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHA 65

Query: 61  FYINDFTVQYVASNSNSELPWYYRLTAVWGAHEGSLLLWVLIQAAWTVAVASFSRGMPQE 120
           F  ++F+V YVASNSNS LPWYY+ +AVWGAHEGSLLLW LI   WT AV+ FSR +PQ 
Sbjct: 66  FMTDNFSVAYVASNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQV 125

Query: 121 SVARVLAVMGMITVGFLLFIILTSNPFLRTLPYFPIDGRDLNPLLQDPGLIIHPPMLYMG 180
            +ARVLAVMGMI+VGFL F+I+TSNPF R LP  P DGRDLNPLLQD GLI+HPPMLYMG
Sbjct: 126 MLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVPTDGRDLNPLLQDFGLIVHPPMLYMG 185

Query: 181 YVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWLFLTLGIVLGSWWAYYELGWGGWW 240
           YVGFSVAF+FAIA+L+ GRLD AWARWSRPWT  AW FL +GI LGSWWAYYELGWGGWW
Sbjct: 186 YVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELGWGGWW 245

Query: 241 FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILV 300
           FWDPVENASFMPWL GTAL+HSLAVTEKRG FK+WTVLLAI+AFSLSLLGTFLVRSG+L 
Sbjct: 246 FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLT 305

Query: 301 SVHAFASDPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSRENSLLVNNVLLM 360
           SVHAFA+DP+RG+FIL FL+ V+GGSL LFA++   V+ +  F L SRE  LL NN++L+
Sbjct: 306 SVHAFAADPSRGIFILFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLV 365

Query: 361 TALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMIPFAFFMGIGPLIRWKRDQIS 420
            A +++L+GTL PLV   L    +S+G P+F+ LF  LM      + +G ++RWK     
Sbjct: 366 VAASMILLGTLYPLVLDALTGAKLSVGPPYFDALFLPLMALLMVVLSVGVVVRWKDTPGK 425

Query: 421 TLFKPMLITAMASLVLAALMMWLNAPTFSPMAYLGWVMAWWILLLHAYELHTRATHRHRF 480
            L   M    + S +LA +  ++    F       + +A W++L    ++  +  H+   
Sbjct: 426 WLVSMMTPVLIGSAILAPVAGFI-VDDFDWPTLTAFALAAWVVLGGLRDIFDKTRHK-GL 483

Query: 481 IVGVKKLQRSHWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLAPGDNFQLNEYNFYFQGV 540
           + G+  L RS+W M L H+GLAV  +G+ +  N S ERD+R+APG++ +L  Y+F FQG 
Sbjct: 484 VKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGA 543

Query: 541 RDKDGPNYDGYIADFEITSQGQYVNTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGE 600
           +  +GPN+        ++ +G+ V TL+ EKR Y   +SMMTEA ID G TRDLY+A+GE
Sbjct: 544 KHFEGPNFISDKGTIVVSREGREVTTLYPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGE 603

Query: 601 RLDDNRSWAVRIYYKPYVRWIWAGGLLMAIGGALAISDKRYRFR 644
            L +N +WAVR++ KPYVRWIW GGLL  +GG LA  D+RYR +
Sbjct: 604 PL-ENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALDRRYRVK 646