Pairwise Alignments

Query, 651 a.a., c-type cytochrome biogenesis protein CcmF from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., Cytochrome c heme lyase subunit CcmF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  348 bits (894), Expect = e-100
 Identities = 184/407 (45%), Positives = 249/407 (61%), Gaps = 9/407 (2%)

Query: 2   IAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWAF 61
           + E G  AL++SL + +L  +    G  ++   +M      AW  F LL ++FA+L+  F
Sbjct: 8   LPEAGFLALLLSLGVNVLTPLATWCGMGQHWRGVMRLTTCGAWTAFTLLLLAFAILVSCF 67

Query: 62  YINDFTVQYVASNSNSELPWYYRLTAVWGAHEGSLLLWVLIQAAWTVAVASFSRGMPQES 121
             +DF+V YVA +S+S+L W  +L AVWG HEGSLLLW L+ + WT   A  SR      
Sbjct: 68  LTSDFSVVYVAQHSHSQLSWGLKLAAVWGGHEGSLLLWALLLSGWTALFAWRSRHESDAL 127

Query: 122 VARVLAVMGMITVGFLLFIILTSNPFLRTLPYFPIDGRDLNPLLQDPGLIIHPPMLYMGY 181
               L+++  I    LLFI+L S+PFLR  P   ++GRDLNP+LQ  GLI+HPP+LY+GY
Sbjct: 128 FPLTLSILSFIMASLLLFIVLWSDPFLRIFPP-AMEGRDLNPMLQHLGLILHPPLLYLGY 186

Query: 182 VGFSVAFSFAIASLMTGRLD--TAWARWSRPWTTAAWLFLTLGIVLGSWWAYYELGWGGW 239
            G   A S A+ASL+ G  +  TAW  W   W    W  LTLGI+LGSWWAY ELGWGGW
Sbjct: 187 GGLMTAASVALASLLCGGFNATTAWVCWR--WALPGWCALTLGIILGSWWAYCELGWGGW 244

Query: 240 WFWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGIL 299
           WFWDPVENAS +PWLA +AL+HSL V+ +RG+F+ W++LLAI    LSLLGT +VRSGIL
Sbjct: 245 WFWDPVENASLLPWLAASALLHSLYVSRQRGSFRHWSLLLAILTLILSLLGTLIVRSGIL 304

Query: 300 VSVHAFASDPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSRENSLLVNNVLL 359
           +SVHAFA D  R + +     A+   SL L+  +               E  +L   +L 
Sbjct: 305 LSVHAFALDNVRAVPLFILFAALSLASLALYGWRAREPYPATRLGGGKCETLILTTLLLF 364

Query: 360 MTALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMIPFAFFM 406
              L +VL+GTL P+++  +G G +S+GAP+FN     + +PF   M
Sbjct: 365 SAVLLIVLVGTLYPMIYGLMGWGRLSVGAPYFNR----VTLPFGLLM 407



 Score = 83.2 bits (204), Expect = 4e-20
 Identities = 97/352 (27%), Positives = 148/352 (42%), Gaps = 54/352 (15%)

Query: 308 DPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSRENSLLVNNVLLMTALAVVL 367
           DP     +L +L A    S LL ++  +  R RG+F    R  SLL    L +  L + L
Sbjct: 248 DPVENASLLPWLAA----SALLHSLYVS--RQRGSF----RHWSLL----LAILTLILSL 293

Query: 368 IGTLLPLVHKQLGLGSVSI----GAPFFNMLFAWLMIPFAFFMGIG-----PLIRWKRDQ 418
           +GTL+      L + + ++      P F +LFA L +      G       P  R    +
Sbjct: 294 LGTLIVRSGILLSVHAFALDNVRAVPLF-ILFAALSLASLALYGWRAREPYPATRLGGGK 352

Query: 419 ISTLFKPMLITAMASLVLAALMMWLNAPTFSPMAY--LGW-------------VMAWWIL 463
             TL    L      L+ +A+++ +   T  PM Y  +GW              + + +L
Sbjct: 353 CETLILTTL------LLFSAVLLIVLVGTLYPMIYGLMGWGRLSVGAPYFNRVTLPFGLL 406

Query: 464 LLHAYELHTRATHRHRFIVGVKKLQRSHWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLA 523
           +L    L   AT R R     K   R     +L H G+ +   GI +      E  + L+
Sbjct: 407 MLVVIVL---ATIRSR-----KVSVRCQLPALLAHTGVFIFAAGIMVSSGSRHEISLNLS 458

Query: 524 PGDNFQLNEYNFYFQGVRDKDGPNYDGYIADFEITSQGQYVNTLHAEKRFYRTAKSMMTE 583
           PG    L  Y F F+ +  +   NY    A   +    + + +L  E+RFY   +  M E
Sbjct: 459 PGQQVVLAGYTFRFERLDLEAKGNYTSEKARITLWRNEKRIGSLQPERRFYAARRQQMME 518

Query: 584 AAIDRGITRDLYIAMGERLDDNRSWAVRIYYKPYVRWIWAGGLLMAIGGALA 635
             I   +  D Y  MGE+   +R +A+R+Y +  VRWIW GGLLM  G  L+
Sbjct: 519 PGIHWNLLHDWYAVMGEKTGPDR-YAMRLYVQTGVRWIWGGGLLMVCGALLS 569