Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)

Query: 37  VNDPLESFNRQMWTINYDYLDPYVVRPVSLFYVGYVPKPVRSGIANFLSNLDEPASMVNN 96
           V DPLES+NR+++  NY + D +V  PV   Y    P  +R+G++NF +NL +  +++N+
Sbjct: 63  VYDPLESWNRRVYHFNYRF-DQWVFLPVVNGYTYVTPSFLRTGVSNFFNNLGDVPNLLNS 121

Query: 97  LLMGNGTKAVDHFNRFWINTSFGLLGLIDIASEAGIKKYDDKAFSDAVGHYGVGNGPYLM 156
           LL   G ++++   R  +NT+ G+ GL D A+  G+ +  +  F   +G YGV  G YL+
Sbjct: 122 LLQLKGHRSLETTGRLLVNTTIGIAGLWDPATAMGLPRQSED-FGQTLGFYGVPGGAYLV 180

Query: 157 VPGYGPYTVREVTD-VVD-GMYFPLAYLNIWAGVGK----WALEGMETRAALVSQEALLQ 210
           +P +GP  +R+    +VD G    + +LN+          WAL  ++ R     +   + 
Sbjct: 181 LPIFGPSNLRDTGGLIVDYGAETQINFLNVSEVSSNHPEIWALRAVDKRYQTSFRYGQM- 239

Query: 211 DSPDPYSLARDAYLQ 225
           +SP  Y   R  Y +
Sbjct: 240 NSPFEYEKVRYIYTE 254