Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., VacJ lipoprotein from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 1e-29
 Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 6/208 (2%)

Query: 27  APDDSSPHSQVNDPLESFNRQMWTINYDYLDPYVVRPVSLFYVGYVPKPVRSGIANFLSN 86
           AP  ++  +   DP E+ NR ++  N D LD Y ++P++  Y    P+ +  GI N   N
Sbjct: 24  APAAATQAATEEDPWEAVNRPIFRFN-DTLDTYALKPLAKGYQAVTPQFLEDGIHNIFRN 82

Query: 87  LDEPASMVNNLLMGNGTKAVDHFNRFWINTSFGLLGLIDIASEAGIKKYDDKAFSDAVGH 146
           L +  ++ NN+L      A     R  +NT+FGL G  D+ ++ G+++ +D+ F   +G+
Sbjct: 83  LGDVTNLANNVLQLKPHAAGVDTARLIVNTTFGLGGFFDVGTKMGLQR-NDEDFGQTLGY 141

Query: 147 YGVGNGPYLMVPGYGPYTVRE-VTDVVDGMYFPLAYL-NIWAGVGKWALEGMETRAALVS 204
           +GV +GPY+++P  GP TVR+ V    D    P  Y+ ++      +AL+ ++TRA+L+S
Sbjct: 142 WGVPSGPYVVIPLLGPSTVRDGVAKYPDTYTKPYRYIDHVPTRNSIFALDLIDTRASLLS 201

Query: 205 QEALLQDSPDPYSLARDAYLQRQAFKAE 232
            E L+Q   D Y   R+AYLQ + FK +
Sbjct: 202 AEKLIQG--DKYIFIRNAYLQNREFKVK 227