Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., predicted lipoprotein (NCBI) from Escherichia coli BW25113

 Score =  205 bits (522), Expect = 6e-58
 Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 6/225 (2%)

Query: 10  RLSWITLFTLFLVGCSSAPDDSSPHSQVNDPLESFNRQMWTINYDYLDPYVVRPVSLFYV 69
           RLS + L T  LVGC+S+  D    S   DPLE FNR M+  N++ LDPY+VRPV++ + 
Sbjct: 4   RLSALALGTTLLVGCASSGTDQQGRS---DPLEGFNRTMYNFNFNVLDPYIVRPVAVAWR 60

Query: 70  GYVPKPVRSGIANFLSNLDEPASMVNNLLMGNGTKAVDHFNRFWINTSFGLLGLIDIASE 129
            YVP+P R+G++NF  NL+EPA MVN  L G+  + + HF RF++NT  G+ G ID+A  
Sbjct: 61  DYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGM 120

Query: 130 AG--IKKYDDKAFSDAVGHYGVGNGPYLMVPGYGPYTVR-EVTDVVDGMYFPLAYLNIWA 186
           A   +++ +   F   +GHYGVG GPY+ +P YG +T+R +  D+ DG Y  L++L    
Sbjct: 121 ANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGFYPVLSWLTWPM 180

Query: 187 GVGKWALEGMETRAALVSQEALLQDSPDPYSLARDAYLQRQAFKA 231
            VGKW LEG+ETRA L+  + LL+ S DPY + R+AY QR  F A
Sbjct: 181 SVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIA 225