Pairwise Alignments

Query, 226 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)) from Xanthobacter sp. DMC5

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 17/195 (8%)

Query: 4   MDIKSAIILITSASSALGSTLATHFVRLGAKVILCDRDQQGLVDTYWRCHALSDQVAYFH 63
           +D+K    ++T  +  +G  +   F+  GA+V + DRD   +V T       +D++A   
Sbjct: 5   IDLKDRFAIVTGGAQGIGRAVVERFLASGARVAIFDRDTDLVVKT-------ADELARAR 57

Query: 64  IKDFSPE-----SIETLLDMVEQKFERAPDVLINNLPSARLPSLVDEKPSEQFIQQLAAI 118
           +   + +      +E  +  V  +F R  D+L+NN   A       + P E++ + +A  
Sbjct: 58  VMPVTVDVSRLADVERAVAEVHAEFGRI-DILVNNAGVAGANHKTWDYPEEEWKKVMAIN 116

Query: 119 ASSLFNFSHACSVRMRQRQTKGVIVNVVCYNTVQ---DRSGIVSANSMVSGFTQSWAQEL 175
               F    A +  M   Q  G IVNV      +   + S   ++ + V   T+S  +EL
Sbjct: 117 LDGPFFCCRAVAPHM-IAQKYGRIVNVASIAGKEGNPNASAYSASKAGVIALTKSLGKEL 175

Query: 176 TPFNIRVGGVVPQIA 190
             ++I V  V P  A
Sbjct: 176 AEYDIAVNCVTPAAA 190