Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Histone deacetylase-like amidohydrolase from Xanthobacter sp. DMC5

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 22/294 (7%)

Query: 4   LIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRL 63
           L+ HP       P GH    ++ R+L + I  Q + S   +           E   I R+
Sbjct: 5   LVTHPAGLSHATPAGHPERADRLRVL-DRIFEQEKFSHLVR-----DLAPRGEREDIIRV 58

Query: 64  HDPDYVQALLEGTLSAAKMRRIGFPWSKP-LIERTLYSVGGTCLTVEQALQSGVA---IH 119
           H  D+V A+ E       +R        P   E  L +VGG C  V++ ++  V    + 
Sbjct: 59  HPGDFVDAMGEAVPQDGLVRIDSDTILSPGSWEAALRAVGGACFAVDEVMEGKVTNAFVA 118

Query: 120 LSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDE 179
           +    HH       GFCL N +AIAA  A +   + +V I+D DVHHG+GT  +    D 
Sbjct: 119 MRPPGHHCETRKPMGFCLMNQVAIAARHAQAKYGLQRVAIVDFDVHHGNGTQEIFWADDS 178

Query: 180 IITLSFHCDKNFP-----ARKPASSMDVGYANQTGDEEFLSTFIQVVEM----AVNLHRP 230
           ++  S H    +P         A +  V    ++GD+   + F + +E      +    P
Sbjct: 179 VLYCSTHEMPLYPGTGAQGETGAVNTIVNAPLRSGDDG--AVFKEAMETRILPRITSFAP 236

Query: 231 DLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLA-KQESIPIACVIGGGY 283
           DLIL  AG D H  D L  L +         R ++ +A K+    +  ++ GGY
Sbjct: 237 DLILISAGFDAHVRDPLASLRLVDTDFGWITRRLMEIADKKCEGRVVSLLEGGY 290