Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., acetylpolyamine aminohydrolase from Pseudomonas simiae WCS417

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 21/180 (11%)

Query: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
           HHA  ++  G+C  N+ AIAA  A++     +V ++D D HHG+GT  +  +R +++ +S
Sbjct: 158 HHAAREYMGGYCYLNNAAIAAQHAVT-QGAKRVAVLDVDFHHGNGTQNIFYDRPDVLFIS 216

Query: 185 FHCDK--NFPARKPAS-----------SMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPD 231
            H D   ++P    A+           +++      T  + + +  I       +   PD
Sbjct: 217 LHGDPAVSYPYFSGAANERGAGAGEGFNLNYPLPKNTTWDHYQTALIDACRQLRDF-APD 275

Query: 232 LILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLG-LAKQESIPIACVIGGGYREDHTAL 290
           +++   GVD   DD      IS   +  +D   +G +     +P   V+ GGY  D   +
Sbjct: 276 VLVISLGVDTFKDD-----PISHFLLDSQDFLGMGEIIASVGVPTLFVMEGGYMVDEIGI 330