Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., acetylpolyamine aminohydrolase from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 18/171 (10%)

Query: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
           HHA  D   GFC  N+ A+AA          +V ++D+D+HHG G   +  +RD+++ +S
Sbjct: 156 HHARYDAAGGFCYINNAAVAAQALRQ--GFQRVAVLDTDMHHGQGIQEIFYDRDDVLYVS 213

Query: 185 FHCD-KNFPARKPASSMDVGYANQTGDEEFL--------STFIQVVEM---AVNLHRPDL 232
            H D  NF         + G A   G    L        + F + +E+   AV     ++
Sbjct: 214 IHGDPTNFYPGVAGFVEERGNAAGQGFNLNLPMPHGASEAVFFEKLELALAAVKNFSAEV 273

Query: 233 ILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGY 283
           ++   G DI+  D    +++++   A+    + GL     +P   V  GGY
Sbjct: 274 LVLSLGFDIYELDPQSKVAVTREGFARLGECIRGL----GLPCVIVQEGGY 320