Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., histone deacetylase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  181 bits (459), Expect = 2e-50
 Identities = 97/301 (32%), Positives = 161/301 (53%), Gaps = 6/301 (1%)

Query: 1   MIPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRI 60
           M+ + +  I++   LP GHR+P+ KY LL E+++ +   ++          P   +   I
Sbjct: 1   MLKIAWSEIFAH-SLPEGHRFPMAKYDLLPEQLLYEGTITQD-----NLFAPEPLDEPFI 54

Query: 61  TRLHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHL 120
              HD  Y   L +  L+ +++R+ GFP S+ L++R +  + GT      AL+ G+ +++
Sbjct: 55  LDTHDAGYWHRLRDLQLTPSEVRKTGFPLSEQLVQREVVIMNGTVQASLFALEYGIGMNI 114

Query: 121 SGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEI 180
           +GG HHA  D G GFCL ND+AIAA+  L   S++KVL++D DVH G+GTA +      +
Sbjct: 115 AGGTHHAFTDRGEGFCLLNDIAIAANHLLKYKSINKVLVVDLDVHQGNGTAQIFEHEPRV 174

Query: 181 ITLSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVD 240
            T S HC  N+P  K  S +DV  A  T D  +L      +   ++  +P+ + + +GVD
Sbjct: 175 FTFSMHCGHNYPFHKEKSDLDVPLAEGTDDATYLQLLRHHLPRLLDEVQPEFVFFQSGVD 234

Query: 241 IHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKA 300
           +   D+LG L ++      RDR +L L +Q ++P+   +GGGY      ++  H    + 
Sbjct: 235 VLATDKLGKLGMTIDGCKARDRAVLELCQQNNLPVTVSMGGGYSRQIAHIIEAHANTFRL 294

Query: 301 A 301
           A
Sbjct: 295 A 295