Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., Deacetylases, including yeast histone deacetylase and acetoin utilization protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 79  AAKMRRIGFPWSKPLIERTLYSV--GGTC-LTVEQALQSG----VAIHLSGGYHHAHADF 131
           AA++    F    PL   T  +   G  C L   QA+  G     A+    G HHA  DF
Sbjct: 118 AARLGLFSFDSGSPLTAGTWAAARGGAACALAAAQAVAGGERSAFALTRPPG-HHAGPDF 176

Query: 132 GSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCD 188
             G+C  N+ AIAA  AL      KV ++D D HHG+GT T+  ER +++T+S H D
Sbjct: 177 LGGYCFLNNAAIAAQ-ALRDAGRAKVAVLDVDYHHGNGTQTIFYERADVLTVSIHGD 232