Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., histone deacetylase family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 74/251 (29%), Positives = 109/251 (43%), Gaps = 34/251 (13%)

Query: 55  AELSRITRLHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVG---------GTC 105
           AE+  + R+H   YV  LL+ +  A  ++         L   T+ S G         G  
Sbjct: 49  AEVVDLERVHPAAYVARLLDASPVAGMVQ---------LDADTVLSAGSVPAARLAAGAA 99

Query: 106 LTVEQALQSG------VAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLI 159
           +   +A   G       A+   G  HHA  D   GFCLF+ +A+AA  A +   + +V +
Sbjct: 100 IDAVRAAARGEMDRAFAAVRPPG--HHAEPDRAMGFCLFSSVAVAARVAQA-EGMARVAV 156

Query: 160 IDSDVHHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVG------YANQTGDEEF 213
           +D DVHHG+GT     + D +   S H    +P    AS   VG       A     E +
Sbjct: 157 VDFDVHHGNGTQAAFEDDDSLFLASIHQMPLYPGTGAASETGVGNIVNVPVAPHAARENW 216

Query: 214 LSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQE-S 272
            +TF   +  A+   RPDLIL  AG D H  D L + S+     A   R +L +A++  S
Sbjct: 217 RATFAGGLMPALESFRPDLILISAGFDAHRRDPLAHQSLEAEDFAWATRAILEVARRTCS 276

Query: 273 IPIACVIGGGY 283
             +   + GGY
Sbjct: 277 GKVVSALEGGY 287