Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Histone deacetylase-like amidohydrolase from Azospirillum sp. SherDot2

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 22/246 (8%)

Query: 55  AELSRITRLHDPDYVQALLEGTLSAAKMRRIG----FPWSKPLIERTLYSVGGTCLTVE- 109
           A++ +++R+H+  YV A+L    +    R  G     P S+  I R   + G  C  V+ 
Sbjct: 50  ADVEQLSRVHERSYVDAVLAAVPTDGYQRLDGDTLLSPGSRGAILR---AAGSVCAAVDA 106

Query: 110 ----QALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVH 165
               +A  +  A+   G  HHA      GFC+FN++A+ A  A  +  + +V ++D DVH
Sbjct: 107 VLAGEATNAFCAVRPCG--HHAEPARAMGFCVFNNIAVGAEHARKVHGLTRVAVVDFDVH 164

Query: 166 HGDGTATLCAERDEIITLSFHCDKNFPAR-------KPASSMDVGYANQTGDEEFLSTFI 218
           HG+GT  + A+   +   S H    +P            + +++     +G  EF     
Sbjct: 165 HGNGTQAMFADDPNLFFASTHQSPLYPGTGNSWERGVDGNILNLPLEPYSGSVEFRQAVE 224

Query: 219 QVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQE-SIPIAC 277
           +V+  A+   +P+L+L  AG D H  D L  L ++        R ++ LA +     +  
Sbjct: 225 RVILPALEAFQPELLLISAGFDAHKRDPLAQLGLTNEDFEWVTRKLVELADRVCGGRVVS 284

Query: 278 VIGGGY 283
            + GGY
Sbjct: 285 ALEGGY 290