Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Acetoin utilization protein AcuC from Alteromonas macleodii MIT1002

 Score =  308 bits (788), Expect = 1e-88
 Identities = 154/299 (51%), Positives = 203/299 (67%), Gaps = 6/299 (2%)

Query: 3   PLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITR 62
           PL++HPIYSQLDLP  HR+PI KY  + +E++ +  ++        F TP   +LS +T 
Sbjct: 4   PLVFHPIYSQLDLPERHRFPIEKYVGIRDELLNRGVEAS------RFVTPSPVDLSFLTA 57

Query: 63  LHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHLSG 122
            +DPDYV AL  G L    MRRIGFPWS+ LIERT  +V GTCLT + AL+ G A++L+G
Sbjct: 58  YYDPDYVDALSTGALDKKAMRRIGFPWSQQLIERTRTAVAGTCLTAKLALEHGKALNLTG 117

Query: 123 GYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIIT 182
           GYHHA ADFGSGFCLFNDL +AA      PSV+ VLI+D DVH GDGTA L     +I T
Sbjct: 118 GYHHAFADFGSGFCLFNDLYLAAKTMQQTPSVENVLIVDLDVHQGDGTAKLAENDRDIFT 177

Query: 183 LSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIH 242
           LS H +KNFP RK  S +D+G    T D+E+L+T  Q + M +   +PD I+YDAGVD+H
Sbjct: 178 LSIHGEKNFPHRKQRSDIDIGLDKGTEDDEYLTTLEQALTMVMRQFQPDAIIYDAGVDVH 237

Query: 243 NDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKAA 301
            +D+LG+L IS   + +RD  +  LA++  +PIA VIGGGY+ D  ALV +H++L +AA
Sbjct: 238 VNDDLGHLHISTQGVYERDTQVFALAERLGVPIAAVIGGGYQRDIAALVEVHIQLYRAA 296