Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Histone deacetylase-like amidohydrolase from Alteromonas macleodii MIT1002

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 32/228 (14%)

Query: 51  TPIAAELSRITRLHDPDYVQALLEGTLSAA---------KMRRIGFPW-------SKPLI 94
           TPIA    ++   HDP YV+++ E    +            R+    W        +  +
Sbjct: 49  TPIAEAYLKLA--HDPYYVKSVFEHAAQSIFSDHEKTLYSERKDNVAWLDEDTGLMRHSL 106

Query: 95  ERTLYSVGGTCLTVEQAL-----QSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFAL 149
              L S G  C  V+  +     Q+  A    G  HHA  D   GFC+FN++ IAA +AL
Sbjct: 107 NAALESAGAGCNAVDWVMEGSDRQAFCATRPPG--HHATYDSAMGFCIFNNIVIAARYAL 164

Query: 150 SLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCDKNFP-ARKPASSMDV----GY 204
               + +V IID DVHHG+GT  + A    I+  S      +P +  P S+ ++      
Sbjct: 165 QNYELKRVAIIDFDVHHGNGTEQIVAGDQRIMLCSSFQHPFYPHSGSPVSASNILSVPLE 224

Query: 205 ANQTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSI 252
           A  TG+E      +Q    A+   +P+LI   AG D H +D + +L +
Sbjct: 225 AGSTGEE--FREKVQHWFNALRNFQPELIFISAGFDAHAEDPMAHLRL 270