Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., deacetylase from Agrobacterium fabrum C58

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 10/168 (5%)

Query: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
           HHA      GFCLFN++AIAA  A      +++ IID DVHHG+GT  +      ++  S
Sbjct: 126 HHAETAKAMGFCLFNNVAIAARHAQKAHGAERIAIIDWDVHHGNGTQDIFWNDISVLFCS 185

Query: 185 FH--------CDKNFPARKPASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYD 236
            H         DKN    K  + ++   +  TG + F   F   V  A+    PDLIL  
Sbjct: 186 THQMPLYPWSGDKNETGVK-NNIVNAPLSPNTGSDHFREAFKSRVLPAIADFSPDLILIS 244

Query: 237 AGVDIHNDDELGYLSISQAAIAQRDRFMLGLA-KQESIPIACVIGGGY 283
           AG D H+ D L  +++           +L +A K  S  +  ++ GGY
Sbjct: 245 AGFDAHHRDPLAQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGY 292