Pairwise Alignments

Query, 600 a.a., DUF3413 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., LPS biosynthesis-modulating metalloenzyme YejM from Erwinia tracheiphila SCR3

 Score =  470 bits (1210), Expect = e-137
 Identities = 249/604 (41%), Positives = 363/604 (60%), Gaps = 29/604 (4%)

Query: 1   MVDSGNTYGDRVSRLVGWGHWFAFFNIIAAMLIGTRYISQSPWPETLLGQLYLALSWVGH 60
           MV S   Y ++VS+++GWGHWFA FNI+ A ++G+RY+  S WP +L+G++Y   SW+GH
Sbjct: 1   MVTSQQRYREKVSQMIGWGHWFALFNILFAFILGSRYLFVSDWPASLVGRIYAFTSWIGH 60

Query: 61  FGFLVFALYLLVLFPLTFIIPSRSLFRFLAVCFSTLGLTVLLIDTQAYQIINLHLNPVVW 120
           F F+VFA YLL++FPLTF++ S+ L RFL+   +T GLT++L+D+  +   +LHLNPVVW
Sbjct: 61  FSFIVFATYLLIIFPLTFVVMSQRLLRFLSAIVATAGLTLILVDSAVFNRFHLHLNPVVW 120

Query: 121 ELLFSDETSSVSADLQHLFVVLPLIFLLELGLSEWVWRKQRKLSHKRIGRPLAAVFFFSF 180
           EL+ + + S ++ D Q +F+ +P IFL+E+  + W W+K R L+ +  G+PLA +F  +F
Sbjct: 121 ELVINPDQSELTRDWQLMFISVPAIFLVEMLFATWSWQKLRSLNRRNFGKPLAVLFISAF 180

Query: 181 IASHLIYVWSDAYLYSPVTSQRANFPLSYPMTAKSFMEKHGLLDKEEYSKRLAEQNS-DI 239
            +SH++Y+W+DA  Y P+T QRAN PLSYPMTA+ F+EKHGLL+ +EY +RL EQ +   
Sbjct: 181 CSSHIMYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLNAQEYQRRLVEQGAPGA 240

Query: 240 DGLIYPLEPLEFSRRANNLNVLIVSINNLRADALTPELMPNTYQFANENLNFTNHYSS-S 298
             + YPL  + F     + N+L+++++ L A  L   L P+  QFA++NLNFT H+SS S
Sbjct: 241 VSVAYPLNNILFRDGGTHNNLLMITVDGLNAATLQQSL-PHLAQFASQNLNFTQHFSSGS 299

Query: 299 NDMFGLFGLFYGLPSTYASSVRVQGNAPLLIDVMKKNDYQFGLFSGNNFADPLYKETMFR 358
               GLFGLFYG+  +Y   V        LID + K  YQFGLF+ + FA PLY++ +  
Sbjct: 300 APDSGLFGLFYGISPSYMDGVLSARMPSALIDALSKQGYQFGLFASDGFASPLYRQALLA 359

Query: 359 --SLPIEAIAVTNDESSPDEQAVQRWAEWLNV--GQKQPWFSYLELTTVEEFSELSSAQE 414
             SLP   I         D Q V +W  W         PWFSYL       FS    A +
Sbjct: 360 DYSLPPSNI-------QHDGQTVVQWQTWFEEQNSTNAPWFSYL------SFSGRGLA-D 405

Query: 415 SAEDRLRSAYNLSVTQADQVINTVLEQLNSLKLMDNTVVVITSNHGTEFNETKTNTWGSN 474
           S +D+    Y  + +  D  I  VL  L +  ++DNTVVVIT+ HG   +       G  
Sbjct: 406 SNQDKFLHHYERNASDVDNQIQQVLSVLRTKGVLDNTVVVITAQHGVALD-------GDI 458

Query: 475 TNYSRYQLQVPMVIHWPGKVAGTYAHRSSHLDFSVTLMQDLLGVSSNPVDYSSGKNLFNE 534
           +  +R  L+VP+++HWP   A      + H D   TLMQ LL VS+ P DYS G++LF  
Sbjct: 459 SMGNRANLRVPLIVHWPNTPAQQINKLTVHADIMTTLMQRLLHVSTAPSDYSQGEDLFAA 518

Query: 535 SKRK-WILAGDARELALITDTQTTVLDKFGNFKVYDGDYQRLKETNPTLPVLMQGLTELQ 593
            +R  W+ +    +L + T   T +LD  G++  +D    +LK+  P L +L+Q LTE +
Sbjct: 519 RRRNDWVASNSNHKLVVTTPQITLLLDNNGSYTAWDNAGNQLKDHKPQLALLLQVLTEEK 578

Query: 594 RFYA 597
           RF A
Sbjct: 579 RFIA 582