Pairwise Alignments

Query, 333 a.a., nucleoid-associated protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., nucleoid-associated protein from Pseudomonas simiae WCS417

 Score =  202 bits (515), Expect = 7e-57
 Identities = 110/331 (33%), Positives = 190/331 (57%), Gaps = 5/331 (1%)

Query: 5   LSNVILHQL-RKNDNDELVVNYRAESLRNDTSTENLVAELHRVFNAKAGKGFGCFKSDS- 62
           + + I+H + +K D    V++ R   L    + EN++A+L+  +NAK GK +G F ++S 
Sbjct: 3   IRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENMLADLNESYNAKQGKAWGFFHAESG 62

Query: 63  --EFQLWLQEMRRGTLPFYEFSQQSAQRLKNELAKYPFADEGILVMAEYQSLATDYLFIG 120
              F  WL+E   G   F  FS+ + + L+  + +   +  G ++ A YQ   TDYL I 
Sbjct: 63  AHPFSGWLKEYFDGGQDFTTFSRTAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIA 122

Query: 121 LLPLNQSLKVTEGLDISATDYLDINKMDIVARIDLSSYETDKESKRYLSYIKGRVGRKVA 180
           LL  ++ + VT+ LD++ + +LD+ ++ + ARI++S ++ +K+SK+Y+S+IKG+ G+KV+
Sbjct: 123 LLHHSEGVAVTDELDVTPSRHLDLGQLHLAARINVSEWQNNKQSKQYISFIKGKNGKKVS 182

Query: 181 DFFLDFLQADIGLDTKQQNQVLMQAVEDFCADAKFEKEEVISYKKQVYEYCNDQIKAGDE 240
           ++F DF+    G+D   + + L++A  DF        E      K + +Y + Q K G+ 
Sbjct: 183 EYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPDESAREKTKTLVDYASSQAKLGEP 242

Query: 241 VRVQELSGELPPSNEGVNFFDFTREQGYQLEESFPADRSTVRKLTKYVGAGGGLNLSFDS 300
           + ++ELSG L   +    F+D  R + Y L    PAD+ T+ +  ++ G   GL++SF++
Sbjct: 243 MGLEELSG-LIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEA 301

Query: 301 LLLGERVFYDPETDTLTIKGTPPNLRDQLTR 331
            LLG+++ YD    TL IKG P  L DQL R
Sbjct: 302 HLLGDKIEYDEAAGTLIIKGLPTQLTDQLKR 332