Pairwise Alignments

Query, 333 a.a., nucleoid-associated protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., nucleoid-associated protein YejK from Erwinia tracheiphila SCR3

 Score =  347 bits (891), Expect = e-100
 Identities = 178/331 (53%), Positives = 237/331 (71%), Gaps = 2/331 (0%)

Query: 1   MSLFLSNVILHQLRKNDNDELVVNYRAESLRNDTSTENLVAELHRVFNAKAGKGFGCFKS 60
           MSL +  + LHQ+ K D   L +  R   L  +     ++ ELHRV++ K  K  G F  
Sbjct: 1   MSLDIEQIALHQMIKRDEHPLELVLRDSLLPANGPVIAMMEELHRVYSVK-NKACGLFDQ 59

Query: 61  DSEFQLWLQEMRRGTLPFYEFSQQSAQRLKNELAKYPFADEGILVMAEYQSLATDYLFIG 120
           +SE    L+  R+G   F  FS+ +  RL++ELAKYPFAD GI++   Y+ LA +YL I 
Sbjct: 60  ESELAAALRNCRKGEDDFLAFSRTATGRLRDELAKYPFADGGIVLFGHYRYLAVEYLLIA 119

Query: 121 LLPLNQSLKVTEGLDISATDYLDINKMDIVARIDLSSYETDKESKRYLSYIKGRVGRKVA 180
           +L    S+ V E LDIS+T YLDI+  DIVARIDL+ +ET+ ES RYL++++GRVGRKVA
Sbjct: 120 VLSSQNSMYVNEQLDISSTHYLDIHHADIVARIDLTEWETNPESTRYLTFLRGRVGRKVA 179

Query: 181 DFFLDFLQADIGLDTKQQNQVLMQAVEDFCADAKFEKEEVISYKKQVYEYCNDQIKAGDE 240
           DFF+DFL A +GLDTK QN+ L+QAV+D+C  A  +K E  +Y++QVY YCN+Q++AG E
Sbjct: 180 DFFMDFLGASVGLDTKAQNRGLLQAVDDYCDQASLDKNERQNYRQQVYSYCNEQLQAGQE 239

Query: 241 VRVQELSGELPPSNEGVNFFDFTREQGYQLEESFPADRSTVRKLTKYVGAGGGLNLSFDS 300
           + ++ELSGEL P +E   F  FT+EQGY+LEE FPADR T+R+LTK+ G+GGGL L+FD+
Sbjct: 240 IELEELSGELAPLSE-KTFQAFTQEQGYELEERFPADRGTLRQLTKFAGSGGGLTLNFDA 298

Query: 301 LLLGERVFYDPETDTLTIKGTPPNLRDQLTR 331
           LLLGER+F+D  TDTLTIKGTPPNLR+QL R
Sbjct: 299 LLLGERIFWDAATDTLTIKGTPPNLREQLQR 329