Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

 Score =  300 bits (767), Expect = 1e-85
 Identities = 168/490 (34%), Positives = 275/490 (56%), Gaps = 19/490 (3%)

Query: 1   MLQAQQRLPSLTQVIVSLGLFLLLA----FSFTA-KLDLPIQLALYIGWFVIMTLGIRLG 55
           M   Q+  PSL   +  + L LL+     F F   +  +P+ + + +  FV    G  LG
Sbjct: 1   MTDEQRATPSLLLALTPVVLTLLILGTQIFYFGVFEPHIPLAIGIALTSFV----GTYLG 56

Query: 56  HKYKDLENAALNGISNGLGAVLILLAVGALVGTWISGGIVPTIIYYGLKAIHPSIFLLAT 115
             ++++       I   L +V +L+ VG ++G WI+ G VPTIIYYGLK + P IFL A 
Sbjct: 57  LTWEEVRAGIFKVIHVALPSVSVLIVVGMIIGIWIASGTVPTIIYYGLKTLSPQIFLAAG 116

Query: 116 MVICSLTALATGTSWGAAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSV 175
           MVIC++ +++ GTSWG+ GT G+A+MGIG+G  IP   TAGAV+SG +FGDK+SPLSD+ 
Sbjct: 117 MVICAVVSVSLGTSWGSVGTVGLALMGIGEGFDIPKYWTAGAVVSGAFFGDKVSPLSDTT 176

Query: 176 ILASSMSNVEVMEHIKGMLPIALISYVITGILFTLFGFHY--AGNVDMSQVETVIAAMEQ 233
            LA +++  +V  HIK M+   + + V+  +++   GF    A +V  +++  + +A+E 
Sbjct: 177 NLAPAVTGTDVFSHIKNMMATTIPAMVLAFLIYLGVGFFVIDAQSVSFAKIAGITSALED 236

Query: 234 QFYITPYSFVPVLIVLGLLAMRMPSFPVISFGSLLGIVWAVMIQDVDFLQAFNTAWAPYN 293
            F +T ++ +P L+V+GL   ++P  P +  G+++G  +A+ +Q       F+ A   Y 
Sbjct: 237 NFTVTGWALLPALVVMGLALKKIPPLPALFAGAVVGGAFAMFMQGQSLQAVFDYANNGYA 296

Query: 294 IESGVSFIDAILNRGGMSSMLGSVAVIVFGLGFGGLLDRVGVLETIAKLFERRVTSPGSL 353
           I++ +  ID++LNRGG+ SM+ ++++++  LGFGG L+  G L +I    + +  +    
Sbjct: 297 IQTNIVEIDSLLNRGGVQSMMWTISLVLIALGFGGALETTGCLRSIINAIKSKAKTFAGT 356

Query: 354 ATSTIGTAFMGNVFGSAMYVSLILTPKICAKNYDRLGYQRKNLSRNAEFGGTLTSGMVPW 413
             + +GTAF  N+     Y+S+ L  ++ +  Y  +GY   NLSR  E GGTL S ++PW
Sbjct: 357 QIAAVGTAFSTNLVAGDPYLSVALPGRMYSPVYRGMGYSTLNLSRGIEEGGTLMSPLIPW 416

Query: 414 SDNGIYMASILGVA-------TLSYAPFMWLSFVCILVTIITSYCGWFVDKCEPTQAMNE 466
           +  G ++ S LG+         L Y P  +  +   L+ I  +Y GWF  K    +   E
Sbjct: 417 NAGGAFVISALGLGISGANLENLLYIPLAFACWTAPLIGIFYAYVGWFSPKATKAE-KEE 475

Query: 467 QEVTAEEIQK 476
            E +  EI K
Sbjct: 476 WESSGAEIAK 485