Pairwise Alignments
Query, 1052 a.a., ribonuclease E from Vibrio cholerae E7946 ATCC 55056
Subject, 1049 a.a., ribonuclease E from Dickeya dianthicola 67-19
Score = 976 bits (2523), Expect = 0.0
Identities = 574/1086 (52%), Positives = 714/1086 (65%), Gaps = 76/1086 (6%)
Query: 1 MKRMLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDY 60
MKRMLINATQ+EELRVALVDGQ+L+DLDIESPGHE KKANIYKG+ITRIEPSLEAAFVDY
Sbjct: 1 MKRMLINATQQEELRVALVDGQQLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY 60
Query: 61 GAERHGFLPLKEIAREYFPDGYSYQGRPNIKDVLNEGQEVIVQIEKEERGSKGAALTTFI 120
GAERHGFLPLKEIAREYFP Y+ GRPNIKDVL EGQEVIVQ++KEERG+KGAALTTFI
Sbjct: 61 GAERHGFLPLKEIAREYFPSSYNAHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFI 120
Query: 121 SLAGSYLVLMPNNPRAGGISRRIEGDERTELKSALSSLELPQGMGLIVRTAGVGKSAEEL 180
SLAGSYLVLMPNNPRAGGISRRIEGD+RTELK AL SLELP GMGLIVRTAGVGKSA+ L
Sbjct: 121 SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALGSLELPDGMGLIVRTAGVGKSADAL 180
Query: 181 EWDLNVLLKHWSAIKQASDSNPAPFLIHQESNVIVRAIRDYLRRDIGEILIDSNSIYERA 240
+WDL LKHW AIK+A++ APFLIHQESNVIVRA RDYLR DIGEILID+ I E A
Sbjct: 181 QWDLAFRLKHWEAIKKAAEGRSAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILELA 240
Query: 241 LEHI-RLVRPDFVNRVKKYEGEVPLFSHFQIESQIESAFQREVRLPSGGSIVIDPTEALT 299
EHI L RPDF +++K Y GE+PLFSH+QIESQIESAFQREVRLPSGGSIVID TEALT
Sbjct: 241 KEHIAALGRPDFGSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT 300
Query: 300 SIDINSARATKGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVE 359
+IDINSARAT+GGDIEETA NTNLEAADEIARQLRLRDLGGL+VIDFIDMTPVRHQREVE
Sbjct: 301 AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE 360
Query: 360 NRLREAVRVDRARVQIGRISRFGLLEMSRQRLSPSLAEASHHICPRCKGTGVIRDNESLA 419
NRLR+AVR DRAR+QIGRISRFGLLEMSRQRLSPSL E+SHH+CPRC GTG IRDNESL+
Sbjct: 361 NRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS 420
Query: 420 LSVLRLIEEEALKDNTSQVLAVVPVSIASYLLNEKRRSINHIEKAQ-QVRITIVPNSDME 478
LS+LRLIEEEALK+NT +V A+VPV IASYLLNEKR ++N IEK Q VR IVP+ ME
Sbjct: 421 LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKREAVNAIEKRQGDVRAIIVPHDGME 480
Query: 479 TPHFEVIRVREGEEQDVLSYLIPKKLEAMKEAEGKEVVDVELKPKRI-EEPVLKGFA--- 534
TPH+ V+RVR+GEE+ LSY++P+ L + E + ++ + +R+ E+P L F
Sbjct: 481 TPHYSVLRVRKGEEKQTLSYMLPQLL----DVESQPSLEEQTPERRVPEQPALASFTMSD 536
Query: 535 -APAEAVPAP-TPKPKAEPQPVAEVQQPAQPGFFSRVFKAIASLFSATPEAAKVEA---P 589
PAE PAP PKAE QP ++ G F R A+ +F+A + + A
Sbjct: 537 IPPAETKPAPVVTAPKAEKQP-----SSSERGLFGRFVGALKGIFAAPADVKEKPAETVE 591
Query: 590 VTQNSEQDKPRRERNDRNNDRRRNPRDKN--RRRGNEENNERNDKETSNSNRKPQERKPK 647
T + ++ K R N R + RR PRD R R + N+R + ++ P P
Sbjct: 592 ATSDEQEQKQERRNNRRQSGRRERPRDNREPRERDEQRRNKRTQPQNADVETAPVAEAPA 651
Query: 648 QERGERNERNDRNERPETERPERQDRRNKRDESKTAKLLEQGRQLAAEAQQEVKAVEPKE 707
Q++ R+E+ R +R E +R ++++R +D+ K + + AA+ + V ++
Sbjct: 652 QDKAVRDEQR-REQRAERQRRRQEEKRQAQDDVKELNAVTE----AADTEDAV----AEQ 702
Query: 708 EKAAVVKERRQRRKLSKQIRVKDQLAAEELD--NLSTAPV--DNAFDAPAPVNLPVTDDF 763
EK A V +RRQRR+L++++RV+D A E L AP + + P P L
Sbjct: 703 EKPAQVMQRRQRRQLTQKVRVQDSDATGENTEAQLPAAPYVQQSVVEVPEPAALAAEVTN 762
Query: 764 ADSAQEDNEQDDQKQRRNRRSPRHLRASGQRRRRGRDRR---PNPFRLRKGGVASPEMAM 820
++ ++ +++ RR+RRSPRHLR SGQRRRR RD R +P + + ASPEMA
Sbjct: 763 TENDAVESNRENGLPRRSRRSPRHLRVSGQRRRRYRDERYPAQSPMPMTQAS-ASPEMAS 821
Query: 821 GKVMPRYDLAPRPQSRH-------------ETAEGAQHVTHVTPTAATAVVESEKVAAPR 867
GKV RY +A + Q A V T A V+++ V+AP
Sbjct: 822 GKVWIRYPVAQQQQPERVEEPVSEFIDAPLSAAPELTAVAVATLPEAVDVLDTAPVSAPA 881
Query: 868 VLGGVAFPEMAMGKVIVRRETAAVQPEPVVQEPVITDVIAETLIAPVEPVVVEATVI--E 925
+ + + + A VQ E + +P T +A P E T + E
Sbjct: 882 TPLSTPTQQETVPTEVPQHLDANVQEE--IAQPQETQQLA--------PQFAETTALVEE 931
Query: 926 APVIEESATETAALETVVAKVAEVEEPATISDEVVAQTTVEVIADKMAEPIKVVKPVTVS 985
AP A A + A+ E+P + + V+ + T EP+ VS
Sbjct: 932 APAEVVVADSDATTRSEPAETQPTEQPQVVHEPVLVENT-----PATQEPV-----AAVS 981
Query: 986 ATSLTAKAVIQQPYASSPMTKAPGSDDIREV-QVNAAPLRAERYQARG-AGSQVARNQAS 1043
A + + V Q YA++PMT+AP + + +V+ A + +G AG A +QAS
Sbjct: 982 APAEISAVVPSQHYAAAPMTRAPAPAYVPDAPRVSDWQRPAFAFSGKGSAGGHAAEDQAS 1041
Query: 1044 AGMSKP 1049
A ++P
Sbjct: 1042 APATRP 1047