Pairwise Alignments

Query, 1052 a.a., ribonuclease E from Vibrio cholerae E7946 ATCC 55056

Subject, 900 a.a., ribonuclease E/G from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  396 bits (1018), Expect = e-114
 Identities = 308/971 (31%), Positives = 453/971 (46%), Gaps = 135/971 (13%)

Query: 2   KRMLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDYG 61
           K MLI+A   EE RVA+VDG+++ + D ES      + NIY  ++TR+EPSL+AAF++YG
Sbjct: 3   KTMLIDAAHPEETRVAIVDGRKIEEFDFESRAKRQLRGNIYLAKVTRVEPSLQAAFIEYG 62

Query: 62  AERHGFLPLKEIAREYFP-------------------DGYSYQG---------------- 86
             RHGFL   EI  +Y+                    D    +                 
Sbjct: 63  GNRHGFLAFNEIHPDYYQIPVADREAIMAEAHDDEDEDDLDRESTGDDVDPESALADEER 122

Query: 87  -------RPNIKDVLNEGQEVIVQIEKEERGSKGAALTTFISLAGSYLVLMPNNPRAGGI 139
                  R  I+DV+   Q ++VQ+ K+ERG+KGAALTT++SLAG Y VLMPN  + GGI
Sbjct: 123 LKRRLMRRYKIQDVIKRRQILLVQVVKDERGAKGAALTTWLSLAGRYCVLMPNTGKGGGI 182

Query: 140 SRRIEG-DERTELKSALSSLELPQGMGLIVRTAGVGKSAEELEWDLNVLLKHWSAIKQAS 198
           SR+I    +R  LKSA+S+LE+P+GMGLI+RTAG  ++  E++ D   LL+ W  I++ +
Sbjct: 183 SRKITNTSDRRRLKSAVSALEVPKGMGLIIRTAGAKRTKAEIKRDYQYLLRLWETIRETT 242

Query: 199 DSNPAPFLIHQESNVIVRAIRDYLRRDIGEILIDSNSIYERALEHIRLVRPDFVNRVKKY 258
            ++ AP +I++E N++ RA+RD   +D   I ++    ++ A + +R++ P    +V  Y
Sbjct: 243 LASHAPSVIYEEENLVRRAVRDMFDKDFDGIQVEGVEGFKEARDFMRVLMPAQAKKVHLY 302

Query: 259 EGEVPLFSHFQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETA 318
            G  PLF+   IE  +    Q  V L SGG +VI+ TEAL +ID+NS RATK  ++E+TA
Sbjct: 303 RGSRPLFAANGIEELLTQIHQPVVPLKSGGYLVINQTEALVAIDVNSGRATKERNVEQTA 362

Query: 319 LNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRLREAVRVDRARVQIGRI 378
             TN+EAA+E ARQLRLRDL GLVVIDFIDM   ++ R VE  L+EA+  DRAR+Q+GRI
Sbjct: 363 FKTNMEAAEEAARQLRLRDLAGLVVIDFIDMDEGKNNRAVERVLKEALSSDRARIQMGRI 422

Query: 379 SRFGLLEMSRQRLSPSLAEASHHICPRCKGTGVIRDNESLALSVLRLIEEEALKDNTSQV 438
           S FGL+E+SRQR    + E +   CP C+GTG IR  ES AL  LR ++ EA K+    V
Sbjct: 423 SPFGLMEISRQRRRLGVIEGATEACPHCQGTGRIRSAESAALMTLRAVDIEAGKNGAGVV 482

Query: 439 LAVVPVSIASYLLNEKRRSINHIEKAQQVRITIVPNSDMETPHFEVIRVREGEEQDVLSY 498
           +  V  ++  Y+LN KR  +  + + + + + +  +  +      + R    E+      
Sbjct: 483 VLKVCTAVGLYILNHKRAYLQSLLERRGLNVIVQIDDSLGQGEHNIERTETNED------ 536

Query: 499 LIPKKLEAMKEAEGKEVVDVELKPKRIEEPVLKGFAAPAEAVPAPTPKPKAEPQPVAEVQ 558
            +  ++E     +  +    E + +  +E ++                   EP+  +E  
Sbjct: 537 FVAPEIEMPNLDDDFDASLYEDEDEEDDEEIIVDDDDDTVESLDREDSDDDEPRERSERH 596

Query: 559 QPAQPGFFSRVFKAIASLFSATPEAAKVEAPVTQNSEQDKPRRERNDRNNDRRRNPRDKN 618
           + ++     R  +          E + VEA  T ++  D    +  D N  RRR  R   
Sbjct: 597 EGSRDRGRGRNRRRRGG--RRDEETSDVEAVDTVSA--DDASDDEEDENGRRRRRGRRGG 652

Query: 619 RRRGNEENNERNDKETSNSNRKPQERKPKQERGERNERNDRNERPETERPERQDRRNKRD 678
           RR    E+ ER D  T    R P    P       N           ERPER +R     
Sbjct: 653 RR--VREDGER-DVYTWVRGRTPSLDDPYVWFDPLNPGRSEGRPERGERPERAER----- 704

Query: 679 ESKTAKLLEQGRQLAAEAQQEVKAVEPKEEKAAVVKERRQRRKLSKQIRVKDQLAAEELD 738
               A    +G  L      +V   E   E+    + RR+R +      V  ++  E   
Sbjct: 705 ---PAVAQSEGEGL------DVVPGEGSGEEGGRSRRRRRRGRGRGDGSVSHEIKVENRA 755

Query: 739 NLSTAPVDNAFDAPAPVNLPVTDDFADSAQEDNEQDDQKQRRNRRSPRHLRASGQRRRRG 798
                P D + + P  V +  T+    +A                      A   +RRR 
Sbjct: 756 TNEGMPPDGSPETPMAVMVEPTEAVETAAP-------------------AIAPEPQRRRV 796

Query: 799 RDRRPNPFRLRKGGVASPEMAMGKVMPRYDLAPRPQSRHETAEGAQHVTHVTPTAATAVV 858
           R         RK   A+ E+A     P  D A  P     T +GA     VTP  A A  
Sbjct: 797 R---------RKSASANVEIA---AEPHPDTAIEP--NEATVQGAPAELDVTPHEALAAE 842

Query: 859 ESE--KVAAPRVLGGVAFPEMAMGKVIVRRETAAVQPEPVVQEPVITDVIAETLIAPVEP 916
            +E   VAAP  +                              PV   V+AE  +AP   
Sbjct: 843 PAEVAPVAAPTAV------------------------------PVTEAVLAEPFVAPTPE 872

Query: 917 VVVEATVIEAP 927
           + V+A + E P
Sbjct: 873 IDVQAIIAEDP 883