Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., RluA family pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  246 bits (628), Expect = 5e-70
 Identities = 137/284 (48%), Positives = 186/284 (65%), Gaps = 11/284 (3%)

Query: 30  LKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPPVTVEVKENEPAPPSTKLSK 89
           LK +PKS++YR+LR G+VRVN KR K + +L  GD +R+PPV V  +  E AP S  ++ 
Sbjct: 4   LKGVPKSMIYRLLRTGQVRVNGKRAKPDTRLADGDTLRIPPVRVAERPEERAPASGLVAS 63

Query: 90  VAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQARFLELVHRIDRDT 149
           VA+    I++ED H L+++KP+G A HGGSG+  GAIE LRA RPQ   LELVHR+DRDT
Sbjct: 64  VAD---AIIFEDKHFLVIDKPAGVASHGGSGVSHGAIELLRAARPQEH-LELVHRLDRDT 119

Query: 150 SGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKV-VNAPLLKNEVNS---I 205
           SG+L+ A+ R+ L  LQA  R   V K Y  L++GH  A+ K  VNAPLLK+ +     +
Sbjct: 120 SGVLVFARTRAGLTGLQAAIRAGAVTKQYLCLMLGH-PAKAKFDVNAPLLKSVLQGGERM 178

Query: 206 VRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRF 265
           VRV  NGKPS T FR +E++  A L+QA+  TGRTHQIRVH  ++GHP+A D +YGDR  
Sbjct: 179 VRVADNGKPSLTFFREMEQYPSARLMQATLGTGRTHQIRVHAAHIGHPLAGDAKYGDREM 238

Query: 266 DAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAHLEQAL 309
           +    + G+ R+FLHA+++ F      +     APL   L+  L
Sbjct: 239 NKRYREMGLNRMFLHASHMSF--DLDGRSYSFSAPLPDDLKDFL 280