Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 4e-31
 Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 15/207 (7%)

Query: 98  VYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAK 157
           V+EDDHLL  +KP+G     G G       + RAL      L +VHR+D  TSG++++A+
Sbjct: 10  VHEDDHLLAFDKPAGLLCVPGRGEDKQDCLSARALLQWPDAL-IVHRLDMGTSGLVVMAR 68

Query: 158 KRSALRHLQAQFREKTVQKYYYALVMGHWDA--ECKVVNAPLLKN-EVNSIVRVNPNGKP 214
                R L A F E+ V K Y A+V G      E  V++APL+ +     + +++P GKP
Sbjct: 69  GIEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPLMADWPRRPLQKIDPAGKP 128

Query: 215 SETRFRILEKFA------EATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAY 268
           S TR++ +  ++       AT V   P+TGR+HQ+RVH   +GHPI  D  YGD    A 
Sbjct: 129 SVTRWKAISAWSGEPASSAATHVLLEPLTGRSHQLRVHLLSIGHPILGDALYGDAALQAR 188

Query: 269 TAQFGIERLFLHAANIQFVHPASEKKL 295
                  RL LHA+ + FVHP + ++L
Sbjct: 189 A-----PRLLLHASELGFVHPVTMEEL 210