Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 7e-33
 Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 27/317 (8%)

Query: 12  DIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPPV 71
           ++  ++ GQR+D           +S +   +++G + V+   V+    +  G  + +   
Sbjct: 10  EVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGSQLAL--- 66

Query: 72  TVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRA 131
                E E       +++  EL+  IVYEDDH+L++NKP+G  VH  +G   G +  L A
Sbjct: 67  -----EAEQEAQGEWIAEDIELD--IVYEDDHILVINKPAGLVVHPAAGHASGTL--LNA 117

Query: 132 LRPQARFLE------LVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGH 185
           L      +       +VHR+D+DT+G+++VAK   A   L  Q + + V + Y  +V+G 
Sbjct: 118 LLHHVPDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGV 177

Query: 186 WDAECKVVNAPLLKNE-VNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244
             A  K+ +AP+ ++  +   + V   GKP+ + +R+L++F   T V+    TGRTHQIR
Sbjct: 178 VTAGGKI-DAPIGRHGGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIR 236

Query: 245 VHTQYMGHPIAWDDRYGDR-RFDAYTAQFGIE------RLFLHAANIQFVHPASEKKLEI 297
           VH  ++G P+  D  YG R R     +   +E      R  LHA  +   HP + + ++ 
Sbjct: 237 VHMAHVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKW 296

Query: 298 HAPLEAHLEQALTKMRQ 314
            +PL       L+ + Q
Sbjct: 297 ESPLPDDFVWLLSLLNQ 313