Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., RluA family pseudouridine synthase from Paraburkholderia sabiae LMG 24235

 Score =  279 bits (714), Expect = 6e-80
 Identities = 150/319 (47%), Positives = 208/319 (65%), Gaps = 22/319 (6%)

Query: 7   QVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVV 66
           QV  I+ID+  AGQRIDNFL    K +PKS +YRILR GEVRVNK RV A+Y+L  GD+V
Sbjct: 19  QVSMIEIDDGAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRVDAQYRLAYGDLV 78

Query: 67  RVPPVTVEVKE---NEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHF 123
           RVPP+ +   +   N PAP +            I++EDDH+L+++KP+G AVHGGSG+ F
Sbjct: 79  RVPPIRIAKSDEPVNAPAPSA---------HFDILFEDDHMLVIDKPAGVAVHGGSGVAF 129

Query: 124 GAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVM 183
           G IE LRA RPQA+FLELVHR+DR+TSG+L++AKKR+AL +L  Q RE  + K YYA V 
Sbjct: 130 GVIEQLRAARPQAKFLELVHRLDRETSGVLMLAKKRAALVNLHEQIRENRMDKRYYACVH 189

Query: 184 GHWDAEC---KVVNAPL---LKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVT 237
           G W ++    + V  PL   L  +    VRV P+G PS T F +++++ +  L++A   T
Sbjct: 190 GEWASDWGRRRAVKEPLHKYLLPDGERRVRVQPDGLPSHTIFNLVDRWTDYALLEAELKT 249

Query: 238 GRTHQIRVHTQYMGHPIAWDDRYGD----RRFDAYTAQFGIERLFLHAANIQFVHPASEK 293
           GRTHQIRVH  ++G PI  D +YGD    ++     A  G++R+FLHA  ++  HPAS +
Sbjct: 250 GRTHQIRVHLAHLGLPIVGDAKYGDFALNKQLARSNANPGLKRMFLHAYRLKLTHPASGE 309

Query: 294 KLEIHAPLEAHLEQALTKM 312
            +   APL A  ++ + ++
Sbjct: 310 TVRFDAPLPAECKRFVAQL 328