Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  128 bits (322), Expect = 2e-34
 Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 49/321 (15%)

Query: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVK-AEYKLEAGD--VVRVP 69
           ++ + AG R+D +L  +L  + ++ +  ++  G V + +  +  A  +++ G   VV VP
Sbjct: 14  VEPEEAGTRLDRWLALRLPELSRTRIKGLMEDGRVSLEETTISDASLRVKPGQCFVVDVP 73

Query: 70  PVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSG--------- 120
           P       + PA P  +     ++   +VYED+ L++++KP+G  VH   G         
Sbjct: 74  P-------DAPAQPEPQ-----DIALTVVYEDEDLIVIDKPAGMVVHPAPGNPDETLVNA 121

Query: 121 --LHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYY 178
              H G  E+L  +    R   +VHRID+DTSG+L+ AK  +A R L  QF   T+++ Y
Sbjct: 122 LLAHCG--ESLAGIGGVKR-PGIVHRIDKDTSGLLVAAKTDAAHRGLATQFAAHTLERAY 178

Query: 179 YALVMG-----HWDAECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFA--EATLV 231
           +ALV G       + E  +   P   N+   +  V   GKP+ TR+R+L+ FA    +LV
Sbjct: 179 WALVWGTPSPRQGEIEGNIGRNP---NDRKKMAVVKSGGKPALTRYRVLKSFAGGAVSLV 235

Query: 232 QASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRF--------DAYTAQFGIERLFLHAAN 283
           +    TGRTHQIRVH    GHP+  D  YG  R         +  TA     R  LHA  
Sbjct: 236 ECRLATGRTHQIRVHMTTQGHPLVGDPVYGRIRGHKGVVLPPEVKTALIQFPRQALHAYL 295

Query: 284 IQFVHPAS--EKKLEIHAPLE 302
           + F HP    + + E   PL+
Sbjct: 296 LGFSHPTKGYDVRFESGMPLD 316