Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  175 bits (443), Expect = 2e-48
 Identities = 111/310 (35%), Positives = 180/310 (58%), Gaps = 13/310 (4%)

Query: 6   TQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDV 65
           ++VQ + + E+ A  R+D + +    ++   ++ + LR G VRV+ KR K+  +L+AG +
Sbjct: 2   SEVQTLTVAEEEAEIRLDRWFKRHFPSVGHGLLEKWLRAGNVRVDGKRAKSNQRLDAGQI 61

Query: 66  VRVPPV-TVEV--KENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLH 122
           +RVPP+ T E   +E  PAP   K++++  L+  ++Y DD ++ LNKP G AV GG+G+ 
Sbjct: 62  IRVPPLPTAEAPPREVRPAPVDEKIARM--LQDAVLYMDDEVIALNKPPGLAVQGGTGMA 119

Query: 123 FGAIEA-LRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYAL 181
              ++A L AL       +LVHR+D+DTSG+LL+ +  +A   L A F+ ++ +K Y+AL
Sbjct: 120 DKHLDAWLDALCFDGGRPKLVHRLDKDTSGVLLLGRTANATAKLAAAFKSRSARKCYWAL 179

Query: 182 VMGHWDAECKVVNAPLLK--NEVNSIVRVN-PNGKPSETRFRILE-KFAEATLVQASPVT 237
           V G        ++APL K   +    V V+  +GK + T +R+++     A  ++  P T
Sbjct: 180 VAGVPRYPQGRIDAPLAKLPGKAGEKVAVDKEDGKHAVTYYRVVDATLKRAAWLELEPRT 239

Query: 238 GRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIER-LFLHAANIQFVHPASEKKLE 296
           GRTHQ+R H   +G PI  D +YG +  DA     G+ R L LHA  ++  HP + K LE
Sbjct: 240 GRTHQLRAHCLLLGTPIMGDGKYGGQ--DALVEGTGVSRKLHLHARAVRLPHPRTGKVLE 297

Query: 297 IHAPLEAHLE 306
           + APL  H++
Sbjct: 298 VVAPLPPHIK 307